Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1114 183 2e-41 seq1678 170 1e-37 seq725 141 5e-29 seq3102 132 2e-26 seq3160 129 3e-25 seq1759 125 4e-24 seq3114 123 1e-23 seq2148 120 2e-22 >seq1114 Length=8361563 Score = 183 bits (202), Expect = 2e-41 Identities = 340/497 (68%), Gaps = 14/497 (3%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 ||| || ||||| || ||||||||||||||| ||||| | ||||||||||| |||| Sbjct 3014868 CATCTTTTTCAACCCGCTTCATAAATAAATCTGGGATCCATAAGGCATAAAATAATTCTC 3014927 Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033 | ||||| | |||||||| || ||||||||| |||||||| || ||||||| ||| | Sbjct 3014928 TTGCTCTGACCTCTTCTTTGCCAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAG 3014987 Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093 ||||||| ||||| | || ||||| || ||| || ||| || ||||| || | Sbjct 3014988 AGTGCCAAGGTTCAAGGTAAATAGCGAATGCTCCTGGTCGTTTGTTGCCTCCTTGGTCAA 3015047 Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGT 26153 | || || || || | |||| | ||| |||||||||| || | ||| | |||| || | Sbjct 3015048 CATACCTGGCTGTATTATTGTACACTCTCAACATTGGCACAAGGCCATTGGAAACACCAT 3015107 Query 26154 TTG----TGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATT 26209 | | |||||| || | ||| | | || || || |||||| || || Sbjct 3015108 TAGTACCTGCTATATAT----GTACCTTTTGCCCTGATGCAATGTACATGAAGTCCTATA 3015163 Query 26210 CCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATG 26269 |||||||| |||| || || ||||| | | | ||| || | || || | ||| Sbjct 3015164 CCACCAGCAGATTTGGAGATTAGGGCACATTGTTTTAGTGTGTCATATATACCCTCAATG 3015223 Query 26270 CTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCG---AATGAGTTGTTCCT 26326 || ||| ||||||| ||| | || |||||||||||||| | |||||| | Sbjct 3015224 CTGTCATCTTTCATAGCTATGAGGAAGCAAGAAGATAATTGTGGTCTTGGAGTTGCGGCG 3015283 Query 26327 GAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCAAAGCTGTATAAGTT 26386 || ||| ||||| || | |||||||| ||||| |||| ||| | |||||| Sbjct 3015284 GA---AAACAATGTGGGACTGGCATGAGTGAAATATTTTTCAGACAACAAATTGTAAGTT 3015340 Query 26387 TCAAGAACTTCATCGAT 26403 |||| | || |||| || Sbjct 3015341 TCAATAGCTGCATCAAT 3015357 Score = 127 bits (140), Expect = 1e-24 Identities = 317/474 (67%), Gaps = 18/474 (4%) Strand=Plus/Plus Query 24703 ATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTT 24762 ||| |||||||| ||||||| | | ||||| ||||||| || || || || | ||| Sbjct 3013690 ATAGTACATTCCTGTTTTCAGACCCATTTTCCATGCGTAAAAGTGAATCGAAGTCAATTT 3013749 Query 24763 TGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTG 24822 | || || | | | | | | ||| | |||||| |||| | ||| Sbjct 3013750 TCCATAATTCGGTTCAGCCACATGAATGTTAAAAGATTGACTTTGGTCTATAAATGCACC 3013809 Query 24823 TCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCT 24882 |||||| ||||| | | ||| | ||||| | || || || || ||||||| ||| Sbjct 3013810 TCTATCAGCAGCCATTTTAATTGTTGTTTTAACTGAAATTTCCCAAACTGTTTTATATAA 3013869 Query 24883 CTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAAT-- 24940 |||| |||| || |||| |||| |||||||||||| || ||||| | | | ||| Sbjct 3013870 CTCTCTTATGTCCTTTGGTATACGCTCAATATTTTGAATGGAACCATTAT-TGTGAATTA 3013928 Query 24941 --AGATTCA--ATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCA 24995 |||||| || || | || ||| | || | | | ||| |||| | | Sbjct 3013929 TAAGATTCTTCATGTCTTCATC-----CCATAAATCCGCCTGTGTTAAG-TCTCGCAATA 3013982 Query 24996 AGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGA 25053 | || | || | | ||||||||||||||||| | ||| ||| ||| |||||| Sbjct 3013983 AATGATGGTTAACAACCTGGAATTCTCCAGACAAAACACGTCT--TTGGTAAATGTTTGA 3014040 Query 25054 AGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCAT 25113 |||||||||||||| | |||||||||||||||||||| | ||||||||||| ||||| Sbjct 3014041 TGTGAATGGTTCAAAGGACTCATTATTTCCTAAGATTTGTGCTGTAGATGCTGTAGGCAT 3014100 Query 25114 TAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167 | |||| ||| || || || | | |||| ||| |||| | || |||||| Sbjct 3014101 TGGAGCTAATAAAAGTGAGTTGCGAAGCCCATGTTTGGCAATTTTTTCTTTTAA 3014154 >seq1678 Length=259751 Score = 170 bits (188), Expect = 1e-37 Identities = 1208/1923 (63%), Gaps = 98/1923 (5%) Strand=Plus/Minus Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724 ||||||| | |||||| | |||| | |||||||||||||||||||| ||||| || Sbjct 80217 GTAAATTTAATTGCTGATGATATTGGTCTTGTTCTAAGATAATACATTCCCGTTTT-AAG 80159 Query 24725 TTCTTCTTCCAAC-CGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAA 24783 || || || || |||||||||| ||||| |||| | | ||| | |||| Sbjct 80158 ACCTGATTGATACGCGAAAAAATGCATAGATGTGAGTTGAGAATAAGTTGGTTTGGCTAA 80099 Query 24784 AAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAAT 24843 ||||| || | ||||||| ||| | |||| | ||||| ||||| |||| || Sbjct 80098 GAACAAATTTAAAGATTGAGATTGATCTATAAAAGGCTGTCTGTCTGCTGCTAGTGTTAT 80039 Query 24844 GATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAAT 24903 | |||||||| || || |||||||||| || | | ||| || || |||||| Sbjct 80038 AACGGTTTTCATACTAATTTCCCAAGCTGTTTTATAAATATTTTTGATTTCTTGTGGAAT 79979 Query 24904 ACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCTCATATTCGGTGT 24963 | |||||||||||||||||| | | | ||||| || | | | || | | Sbjct 79978 TGAAGGAATATTTTGAACTGATCCCTCGTGT-TCAATTAATAAATTTT----TTAGAT-- 79926 Query 24964 CCAAAGA---TTAATTTTTTCAAGATCTCTAATCAAG----TGTTTATTTATGATAATAA 25016 | |||| | ||||| | | | | |||||| |||| ||| || | | Sbjct 79925 CATAAGACCATAAATTTAAACGAATTAATTCATCAAGAAGATGTTCATTAATAACTTGGA 79866 Query 25017 ATTCTCCAGACAAAA---CTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATT 25073 |||| |||| || | ||| || ||| ||| || ||||| |||||||| ||||||| Sbjct 79865 ATTCCCCAG-CATGAGTCCTCCTCATATAAATA--TTAGAAGTAAATGGTTCGAAACATT 79809 Query 25074 CATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAAT 25133 | ||||| || |||||||||||||| || || ||||| || | | | || Sbjct 79808 CGTTATTATTAAAAATTTGAGAAGTAGAAGCAGTAGGCATAGGAGCAACCATCAAACTAT 79749 Query 25134 TTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTA 25193 | | | |||| |||||| || | || | |||| | ||||| ||| | || | Sbjct 79748 TACGTACACCAAATTTAAGGATTTTTTCTCTTAAGATTTCCCA-TCT----TTCCATAGA 79694 Query 25194 ACTCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGAT 25253 | | | |||| | |||| || || || || | |||| | ||| ||| | Sbjct 79693 AGAAGGTGGT-TTATTACATAAGTCGAAATGAAAGAGACCACGACTTAAAGGAGATCCTT 79635 Query 25254 CAAAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAACGCAGCAT 25313 |||||| | || || | || | | | ||| || ||||| |||| || Sbjct 79634 CAAAAGAAGCGTAAGGTCCATCAATTTTAGAAAGATCACAAGAAGAATCTAAAGCAGAAT 79575 Query 25314 AATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAA 25373 |||| || | || ||||| || || |||||| | ||||| ||| | ||| |||| | Sbjct 79574 AATATATTTCCTCGAAAATGGCCTTATTTAAAGATCGAGCTTGTTCACTATCAAAAGGAT 79515 Query 25374 TTTCCATTAAGGCGAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGTT 25433 || | | || || || || || || ||||| || | ||| | || | ||||| Sbjct 79514 ATTTTAAAATAGCAAATACATTAGCCAAACCTTGAACACCAATTCCTATAGGTCTATGTT 79455 Query 25434 TATTATTACTTATCTCA-GTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCT 25492 | ||||||| |||| |||||| | ||||| ||| ||||||| || ||| || Sbjct 79454 TTAAATTACTT-TCTCTTGTTTCTTTTAAAGGATAAAAAGTTGTATCAATTACACGATTA 79396 Query 25493 AGATTCTTTATGGCAAGCTTTGTGTATTTTCTCAACTCAATAAAGTCAAAATAAGGCTTA 25552 ||||| | ||| ||| || | || | |||| | ||| ||| Sbjct 79395 AGATTTACAGTTACAAT-TTTCACTACTCTCCC----CAATTTTTTTAAATTAAA----- 79346 Query 25553 TCGTTTATATCTCTTTTTAC-AAATTTAGATAAAGCGATTGATGCTAAATTACAAACAGC 25611 | | | |||| | |||||| | |||| || || |||||||||||||| Sbjct 79345 ------AGAGCCATTTTCAATAAATTTCGGTAAACAAATACTGGCCAAATTACAAACAGC 79292 Query 25612 ---TTGTTCTTTCCCGTCAGAATATTCATTGATCTCGATACATAAGTTGCTAGATTTGAT 25668 || |||||| | | ||||||| | | || || |||| | || |||||| || Sbjct 79291 GATTTCTTCTTTACTG---GAATATTGAATAATTTCCGTACAAAGATTTGAAGATTTAAT 79235 Query 25669 TACTCCATAATTCTTTTGATTATTGCATGTATTGACAA-TATCTTTATATCCTAAATATG 25727 |||| ||| | ||||||| | || |||| |||| ||||||||||| | | | Sbjct 79234 AGTTCCAAGATTTTGTTGATTACTTAATCTATT-ACAAGTATCTTTATATAACATGAAAG 79176 Query 25728 GCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTTACT- 25786 | ||||| ||||| ||||||| | ||| || | ||| | || | || |||| Sbjct 79175 GAGTTCCAGTTTCGATTTGAGCTTCTATTATAGCTTTCCATAATTTTTGAGCAGGTACTA 79116 Query 25787 ---TTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTTGA 25843 |||| | |||| ||| | | |||| ||||||| || || || Sbjct 79115 CAGTTCTATTTTTAGTTTTT-TCATA------TTTTTCATAAAGTTTTACGAAATC---- 79067 Query 25844 TTTATTTTCTCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATAAA 25903 || | | || | | | | | || || || || | | ||||| |||| | Sbjct 79066 ---ATCTCCCCACAAA------TCCACAAGTTTTTCAGCATCAC--TAGGACAAAATAGA 79018 Query 25904 TGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAA 25963 ||| || ||||| ||||| | | |||||||| ||| |||||| | ||| | Sbjct 79017 GACCATTCTTTATTTTCAGCAACTCTTTTCATAAATAGATCATTAATCCATAAAGCAGTA 78958 Query 25964 AATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCA 26023 || | |||||| |||||||| ||||||| || ||| || ||| |||||| |||||| Sbjct 78957 AAAATATCTCTAGCTCTCATATCTTCTTGACCAGTATTTTTCCTTAAATCTAATAAATCA 78898 Query 26024 AAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCA 26083 || ||||| ||||| ||||||||||| ||||| ||| |||||| || ||| Sbjct 78897 AAGATATCCTTATGCCAAGGTTCTAAATAAATAGCCAAAGATGAAGATCTTTTACCACCA 78838 Query 26084 CCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTT 26143 ||||||| | ||| || || ||| ||||||| | | ||||| | || Sbjct 78837 CCTTGATTAATATATTTTTTTGTAGAATTTAAAACTTGAATTAAAGGAACAATACCTTGA 78778 Query 26144 GAAAATCCGTTTG-TGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAAT 26202 ||||| || | || | | || | | ||| | ||||||| || || || Sbjct 78777 GAAAACCCACCAGTTGTTTTTAAAGAAGCA-CCTCTTCCTCTAATAGAATGTAAATTTAT 78719 Query 26203 ACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCC 26262 || |||||||||| |||| ||||| ||||| | | | ||| || ||||||| Sbjct 78718 TCCTATTCCACCAGAATATTTAGAAATTATAGCACATTGTTTTATTGTCTCATAAATTCC 78659 Query 26263 TTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGT 26322 || || ||| |||| ||||||||||||| || |||||| | || | Sbjct 78658 TTCAATTGAATCTTCTTTTGGAGTTAATAAAAAACAACTAGCTAATTGTCCGTTAGAAAT 78599 Query 26323 TCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC---ACTCAAAGCTGT 26379 | ||||| |||| || || |||||||||||| |||| ||| | ||||| | Sbjct 78598 ACAAGAATTGTATAAAGTAGGAGTAGCATGAGTAAAATAATGTTCAGAAATCAAATC--- 78542 Query 26380 ATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAACCA 26439 ||||||||| ||||| ||| || | || || || | || | ||| | | Sbjct 78541 ATAAGTTTCTTTAACTTTATCCCAATCTTCCCTATGAATTTGTAAAGATACTCTCATAAA 78482 Query 26440 CATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCT-CTAAT--CAAATAAGATTT 26496 | || |||||||| |||||||| |||| |||| ||||| ||||||||||| Sbjct 78481 TACATCTTGAGGTCTTTCAATTA------TTTCTTTATCTACTAATAGTAAATAAGATTT 78428 Query 26497 TTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCTTTTTTGTACTATAATTGA 26556 || | || | || ||||| ||| | || ||||||| | ||||||| || Sbjct 78427 CATTAGACTTATTAAGCCAAAGTAAGTAAAATAATAATCTCTAGAGTAATCTATAATAGA 78368 Query 26557 ATC 26559 ||| Sbjct 78367 ATC 78365 >seq725 Length=108332 Score = 141 bits (156), Expect = 5e-29 Identities = 440/675 (65%), Gaps = 17/675 (3%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||||| |||| | ||| || ||||| ||||| | | |||||||| ||| |||| Sbjct 45641 GGACAAAATAGAGACCACTCTTTATTTTCAGCAACTCTTTTCATAAATAGATCATTAATC 45582 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | ||| ||| | |||||| |||||||| ||||||| || ||| || ||| | Sbjct 45581 CATAAAGCAGTAAAAATATCTCTAGCTCTCATATCTTCTTGACCAGTATTTTTCCTTAAA 45522 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 ||||| |||||||| ||||| ||||| ||||||||||| ||||| ||| | Sbjct 45521 TCTAATAAATCAAAGATATCCTTATGCCAAGGTTCTAAATAAATAGCCAAAGATGAAGAT 45462 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 ||||| || |||||||||| | ||| || || ||| ||||||| | | ||| Sbjct 45461 CTTTTACCACCACCTTGATTAATATATTTTTTTGTAGAATTTAAAACTTGAATTAAAGGA 45402 Query 26132 ACTAATCCAGTTGAAAATCCGTTTG-TGCTATGAATCTTGGATCCTGTCGATCTAATATC 26190 || | || ||||| || | || | | || | | ||| | ||||||| Sbjct 45401 ACAATACCTTGAGAAAACCCACCAGTTGTTTTTAAAGAAGCA-CCTCTTCCTCTAATAGA 45343 Query 26191 GTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGT 26250 || || || || |||||||||| |||| ||||| ||||| | | || ||| Sbjct 45342 ATGTAAATTTATTCCTATTCCACCAGAATATTTAGAAATTATAGCACATTGTTTAATTGT 45283 Query 26251 ATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310 || ||||||||| || ||| |||| ||||||||||||| || |||||| Sbjct 45282 TTCATAAATTCCTTCAATTGAATCTTCTTTTGGAGTTAATAAAAAACAACTAGCTAATTG 45223 Query 26311 CGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTC--- 26367 | || | | ||||| |||| || || |||||||||||| |||| ||| Sbjct 45222 TCCGTTAGAAATACAAGAATTGTATAAAGTAGGAGTAGCATGAGTAAAATAATGTTCAGA 45163 Query 26368 ACTCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGC 26427 | ||||| | ||||||||| ||||| ||| || | || || || | || Sbjct 45162 AATCAAATC---ATAAGTTTCTTTAACTTTATCCCAATCTTCCCTATGAATTTGTAAAGA 45106 Query 26428 TGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCT-CTAAT-- 26484 | ||| | | | || |||||||| |||||||| |||| |||| ||||| Sbjct 45105 TACTCTCATAAATACATCTTGAGGTCTTTCAATTA------TTTCTTTATCTACTAATAG 45052 Query 26485 CAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCTTTTTTG 26544 ||||||||||| || | || | || ||||| ||| | || ||||||| | Sbjct 45051 TAAATAAGATTTCATTAGACTTATTAAGCCAAAGTAAGTAAAATAATAATCTCTAGAGTA 44992 Query 26545 TACTATAATTGAATC 26559 ||||||| ||||| Sbjct 44991 ATCTATAATAGAATC 44977 >seq3102 Length=166364 Score = 132 bits (146), Expect = 2e-26 Identities = 132/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || ||||| |||||| ||| ||| |||| | |||||| | | |||||||||||| | Sbjct 1009 TTGGGACAAAATAAAGACCATTCATCATTATTTTCAACTCTTTTCATAAATAAATCATTA 950 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 |||| | || ||| | ||||| ||||||||||||||||| ||| | ||||| | Sbjct 949 GTCCAAAGACCAGTAAAAACATCTCGTGCTCTCATTTCTTCTTTACCGACACTCTTTCGT 890 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCA 26059 | ||| |||||||||||||| ||| |||||||||||||||| |||| ||| Sbjct 889 ATATCCAAGAAATCAAAAATGTCTTTGTGCCATGGTTCTAAAAAGATGGCA 839 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 24688 TGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTT-CCAACCGTAAAAAT 24746 ||||||||||| |||||| |||||||||||||| || ||| || ||||||||| |||| Sbjct 2171 TGGTTTAGTTCGAAGATAGTACATTCCAGTTTT-AAGACCTTGTTTCCAACCGTAGAAAT 2113 Query 24747 GCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTT 24806 ||||||||| || | | | | || ||||||| | || | ||||||| || Sbjct 2112 GCATTGATGATAAAGTAGAGTAGGAAGGTGTAGCTAAAAAGATATTTAGAGATTGAGATT 2053 Query 24807 GGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGT 24866 || ||||| |||||||||| || ||||| ||||||| | ||||| ||| || Sbjct 2052 GGTCTACAAAGTGTTGTCTATCCGCGGCTAAATCAATGACACTCTTCATTTTTATTTCCC 1993 Query 24867 AAGCTGTTTTGTA 24879 || ||||||| || Sbjct 1992 AAACTGTTTTATA 1980 >seq3160 Length=451458 Score = 129 bits (142), Expect = 3e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || ||||| |||||| ||| ||| |||| | |||||| | | |||||||||||| | Sbjct 144526 TTGGGACAAAATAAAGACCATTCATCATTATTTTCAACTCTTTTCATAAATAAATCATTA 144585 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 |||| | || ||| | ||||| ||||||||||||||||| ||| | ||||| | Sbjct 144586 GTCCAAAGACCAGTAAAAACATCTCGTGCTCTCATTTCTTCTTTACCGACACTCTTTCGT 144645 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCA 26059 | ||| |||||||||||||| ||| ||||||||| |||||| |||| ||| Sbjct 144646 ATATCCAAGAAATCAAAAATGTCTTTGTGCCATGGCTCTAAAAAGATGGCA 144696 Score = 107 bits (118), Expect = 1e-18 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 24688 TGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTT-CTTCCAACCGTAAAAAT 24746 ||||||||||| |||||| ||||||||||| || || ||| ||||||||||| |||| Sbjct 143364 TGGTTTAGTTCGAAGATAGTACATTCCAGTCTT-AAGACCTTGTTTCCAACCGTAGAAAT 143422 Query 24747 GCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTT 24806 |||| |||| || ||| | | || ||||||| | |||| || |||| || Sbjct 143423 GCATCGATGATAAAGTTGAGTAGGAAGGTGTGGCTAAAAAGATATTCAGAGACTGAGATT 143482 Query 24807 GGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGT 24866 || ||||| |||||||||| || ||||||||||| | | ||||| ||| || Sbjct 143483 GGTCTACAAAGTGTTGTCTATCCGCGGCTAAGTCAATAACACTCTTCATTTTTATCTCCC 143542 Query 24867 AAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATC 24926 || ||||||| || | ||| ||||| ||| || || ||||| |||| || | Sbjct 143543 AAACTGTTTTATAAAGATTTTTAATCTCGAGTGGTATTGATGGGATATTCTGAATAGAAC 143602 Query 24927 CAT 24929 ||| Sbjct 143603 CAT 143605 >seq1759 Length=1856 Score = 125 bits (138), Expect = 4e-24 Identities = 703/1107 (64%), Gaps = 55/1107 (5%) Strand=Plus/Minus Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724 ||||||| | |||||| | |||| | |||||||||||||||||||| ||||| || Sbjct 1172 GTAAATTTAATTGCTGATGATATTGGTCTTGTTCTAAGATAATACATTCCCGTTTT-AAG 1114 Query 24725 TTCTTCTTCCAAC-CGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAA 24783 || || || || |||||||||| ||||| |||| | | ||| | |||| Sbjct 1113 ACCTGATTGATACGCGAAAAAATGCATAGATGTGAGTTGAGAATAAGTTGGTTTGGCTAA 1054 Query 24784 AAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAAT 24843 ||||| || | ||||||| ||| | |||| | ||||| ||||| |||| || Sbjct 1053 GAACAAATTTAAAGATTGAGATTGATCTATAAAAGGCTGTCTGTCTGCTGCTAGTGTTAT 994 Query 24844 GATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAAT 24903 | |||||||| || || |||||||||| || | | ||| || || |||||| Sbjct 993 AACGGTTTTCATACTAATTTCCCAAGCTGTTTTATAAATATTTTTGATTTCTTGTGGAAT 934 Query 24904 ACTTGCAATATTTTGAACTGATC---CATTTTCTCTCAATAGATTCAATCTCATATTCGG 24960 | ||||||||||||||||| | | ||| | |||| ||| | | | || Sbjct 933 TGAAGGAATATTTTGAACTGATCCCTCGTGTTCAATTAATAAATT---TTTTAGATCATA 877 Query 24961 TGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAG----TGTTTATTTATGATAATAA 25016 | || || ||||| | | | | |||||| |||| ||| || | | Sbjct 876 AGACC----ATAAATTTAAACGAATTAATTCATCAAGAAGATGTTCATTAATAACTTGGA 821 Query 25017 ATTCTCCAGACAAAA---CTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATT 25073 |||| |||| || | ||| || ||| ||| || ||||| |||||||| ||||||| Sbjct 820 ATTCCCCAG-CATGAGTCCTCCTCATATAAATA--TTAGAAGTAAATGGTTCGAAACATT 764 Query 25074 CATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAAT 25133 ||||||| || ||||||||||| || || || ||||| || | | | || Sbjct 763 CATTATTATTAAAAATTTGAGAAGTTGAAGCAGTAGGCATAGGAGCAACCATCAAACTAT 704 Query 25134 TTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTA 25193 | | | |||| |||||| || | || |||||| | |||| ||| || || | Sbjct 703 TACGTACACCAAATTTAAGGATTTTTTCTTTTAAGATTTCCC-ATC----TTTCCATAGA 649 Query 25194 ACTCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGAT 25253 | | | |||| | |||| || || || || | |||| | ||| ||| | Sbjct 648 AGAAGGT-GGTTTATTACATAAGTCGAAATGAAAAAGACCACGACTTAAAGGAGATCCTT 590 Query 25254 CAAAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAACGCAGCAT 25313 |||||| | || || | || | | | ||| || ||||| |||| || Sbjct 589 CAAAAGAAGCGTAAGGTCCATCAATTTTAGAAAGATCACAAGAAGAATCTAAAGCAGAAT 530 Query 25314 AATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAA 25373 |||| || | || ||||| || || |||||| | ||||| ||| | ||| |||| | Sbjct 529 AATATATTTCCTCGAAAATGGCCTTATTTAAAGATCGAGCTTGTTCACTATCAAAAGGAT 470 Query 25374 TTTCCATTAAGGCGAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGTT 25433 || | | || || || || || || ||||| || | ||| | || | |||| Sbjct 469 ATTTTAAAATAGCAAATACATTAGCCAAACCTTGAACACCAATTCCTATAGGTCTATGTC 410 Query 25434 TATTATTACTTATCTC-AGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCT 25492 | ||||||| |||| |||||| | ||||| ||| ||||||| || ||| || Sbjct 409 TTAAATTACTT-TCTCTTGTTTCTTTTAAAGGATAAAAAGTTGTATCAATTACACGATTA 351 Query 25493 AGATTCTTTATGGCAAGCTTTGTGTATTTTCTC-AACTCAATAAAGTCAAAATAAGGCTT 25551 ||||| | ||| ||| || | || | || | | || | |||| | || Sbjct 350 AGATTTACAGTTACAA-TTTTCACTACTCTCCCTAATTTTTTTAAATTAAAAGA--GC-- 296 Query 25552 ATCGTTTATATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAAACAGC 25611 | ||| | |||||| | |||| || || |||||||||||||| Sbjct 295 -----------CATTTTCAATAAATTTCGGTAAACAAATACTGGCCAAATTACAAACAGC 247 Query 25612 ---TTGTTCTTTCCCGTCAGAATATTCATTGATCTCGATACATAAGTTGCTAGATTTGAT 25668 || |||||| | |||||||| | | || || |||| | || |||||| || Sbjct 246 GATTTCTTCTTTAC---TAGAATATTGAATAATTTCAGTACAAAGATTTGAAGATTTAAT 190 Query 25669 TACTCCATAATTCTTTTGATTATTGCATGTATTGACAA-TATCTTTATATCCTAAATATG 25727 |||| ||||| ||||||| | || |||| |||| ||||||||||| | | | | Sbjct 189 AGTTCCAAGATTCTGTTGATTACTTAATCTATT-ACAAGTATCTTTATATAACATAAAAG 131 Query 25728 GCGTTCCTGTTTCAATTTGAGATACTA 25754 | ||||| ||||||||||||| | ||| Sbjct 130 GAGTTCCAGTTTCAATTTGAGCTTCTA 104 >seq3114 Length=200817 Score = 123 bits (136), Expect = 1e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || ||||| |||||| ||| || |||| | |||||| | | |||||||||||| | Sbjct 178390 TTAGGACAAAATAAAGACCATTCTTCATTATTTTCAACTCTTTTCATAAATAAATCATTA 178331 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 |||| | || ||| | ||||| ||||||||||||||||| ||| | ||||| | Sbjct 178330 GTCCAAAGACCAGTAAAAACATCTCGTGCTCTCATTTCTTCTTTACCGACACTCTTTCGT 178271 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCA 26059 | ||| |||||||||||||| ||| ||||||||| |||||| |||| ||| Sbjct 178270 ATATCCAAGAAATCAAAAATGTCTTTGTGCCATGGCTCTAAAAAGATTGCA 178220 Score = 114 bits (126), Expect = 7e-21 Identities = 172/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 24689 GGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTT-CCAACCGTAAAAATG 24747 |||||||||| |||||| ||||||||||| || || ||| || ||||||||| ||||| Sbjct 179551 GGTTTAGTTCGAAGATAGTACATTCCAGTCTT-AAGACCTTGTTTCCAACCGTAGAAATG 179493 Query 24748 CATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTG 24807 |||||||| || | | | | || ||||||| | ||| | ||||||| ||| Sbjct 179492 CATTGATGATAAAGTAGAGTAGGAAGGTGTAGCTAAAAAAATGTTTAGAGATTGAGATTG 179433 Query 24808 GCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTA 24867 | ||||| |||||||||| || ||||||||||||| | ||||| || || | Sbjct 179432 GTCCACAAAGTGTTGTCTATCCGCTGCTAAGTCAATGACACTCTTCATTTTAATTTCCCA 179373 Query 24868 AGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCC 24927 | ||||||| || | ||| |||||| ||| || || ||||| |||| || || Sbjct 179372 AACTGTTTTATAAAGATTTTTAATCTCAAGTGGTATTGATGGGATATTCTGAATAGAACC 179313 Query 24928 AT 24929 || Sbjct 179312 AT 179311 >seq2148 Length=154875 Score = 120 bits (132), Expect = 2e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || ||||| || ||| ||| ||| |||| | || ||| | | |||||||||||| | Sbjct 61051 TTAGGACAAAACAAAGACCATTCATCATTATTTTCTACTCTTTTCATAAATAAATCATTA 60992 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 |||| | || ||| | ||||| ||||||||||||||||| ||| | ||||| | Sbjct 60991 GTCCAGAGACCAGTAAAAACATCTCGTGCTCTCATTTCTTCTTTACCGACACTCTTTCGT 60932 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCA 26059 | ||| |||||||||||||| ||| ||||||||| |||||| |||| ||| Sbjct 60931 ATATCCAAGAAATCAAAAATGTCTTTGTGCCATGGCTCTAAAAAGATGGCA 60881 Score = 111 bits (122), Expect = 8e-20 Identities = 172/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 24688 TGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTT-CCAACCGTAAAAAT 24746 ||||||||||| |||||| ||||||||||| || || ||| || ||||||||| |||| Sbjct 62213 TGGTTTAGTTCGAAGATAGTACATTCCAGTCTT-AAGACCTTGTTTCCAACCGTAGAAAT 62155 Query 24747 GCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTT 24806 ||||||||| || | | | | | || ||||||| | || | ||||||| || Sbjct 62154 GCATTGATGATAAAGTAGAATAGGAAGGTGTAGCTAAAAAGATATTTAGAGATTGAGATT 62095 Query 24807 GGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGT 24866 || ||||| |||||||||| || ||||| ||||||| | ||||| ||| || Sbjct 62094 GGTCTACAAAGTGTTGTCTATCCGCGGCTAAATCAATGACACTCTTCATTTTTATTTCCC 62035 Query 24867 AAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATC 24926 || ||||||| || | ||| ||||| ||| || || ||||| |||| || | Sbjct 62034 AAACTGTTTTATAAAGATTTTTAATCTCGAGTGGTATTGATGGGATATTCTGAATAGAAC 61975 Query 24927 CAT 24929 ||| Sbjct 61974 CAT 61972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253022816369900