Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1114 282 4e-71 seq3133 214 2e-50 seq2310 150 2e-31 seq5346 116 3e-21 seq2115 116 3e-21 seq1358 95.1 1e-14 >seq1114 Length=8361563 Score = 282 bits (312), Expect = 4e-71 Identities = 1154/1799 (64%), Gaps = 59/1799 (3%) Strand=Plus/Plus Query 138150 AGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACAT 138209 ||| || || || || |||| || |||| |||||| || || | | | ||| ||||| Sbjct 3013639 AGACTTGTCAACTGTGAACTGAATCGCATTAGCGGCAGGCTTTATGCGTAAATAGTACAT 3013698 Query 138210 TCCCGTTTTTA-ACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAG 138268 ||| ||||| | ||||||||||| | ||||| | ||| |||||||| | | | ||| Sbjct 3013699 TCCTGTTTTCAGACCCATTTTCC-ATGCGTAAAAGTGAATCGAAGTCAATTTTCCATAAT 3013757 Query 138269 TCGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAA 138328 |||||| |||| | |||||||| |||||||| || || || || || |||| |||| Sbjct 3013758 TCGGTTCAGCCACATGAATGTTAAAAGATTGACTTTGGTCTATAAATGCACCTCTATCAG 3013817 Query 138329 TGGCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAA 138388 ||||| |||||| ||||| | || ||||| || || || |||| || | Sbjct 3013818 CAGCCATTTTAATTGTTGTTTTAACTGAAATTTCCCAAACTGTTTTATATAACTCTCT-- 3013875 Query 138389 TATGTCGC--GGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATT 138446 |||||| ||||| |||||||||||||| || || ||| || |||| Sbjct 3013876 TATGTCCTTTGGTATACGCTCAATATTTTGAATGGAACCATTATTGTGAATTATAAGATT 3013935 Query 138447 TCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTAT 138506 ||||||| || | | | || | || | ||||| | | || ||| | Sbjct 3013936 CTTCATGTCTTCATCCCATAAATCCGCCTGTGTTAAGTCTCGCAATAAATGATGGTTAAC 3013995 Query 138507 GACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAA 138566 ||||| ||||| || | ||| || || | ||||||||| ||||| || ||||| Sbjct 3013996 AACCTGGAATTCTCCAGACAAAACACGTCTTTGGTAAATGTTTGATGTGAATGGTTCAAA 3014055 Query 138567 CGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAG 138626 || || || ||||| | || || || || | || || ||||| || | ||||| Sbjct 3014056 GGACTCATTATTTCCTAAGATTTGTGCTGTAGATGCTGTAGGCATTGGAGCTAATAAAAG 3014115 Query 138627 AGAATTCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAA 138683 || || || | || || ||| ||| ||| || | ||||||||||| | Sbjct 3014116 TGAGTTGCGAAGCCCATGT---TTGGCAATTTTTTCTTTTAAAACAGACCAGTCCCATAG 3014172 Query 138684 ATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCC 138743 ||| | || |||| | |||||| || || ||||| || || |||| ||||| || Sbjct 3014173 ATCAGTTGGAGTTTTATCCCACATGTCATATTGTAAGATGCCTTGGCTTGTTGGACTTCC 3014232 Query 138744 TTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACC 138803 ||| || | | || || || | |||||||| || || ||||| | || || Sbjct 3014233 TTCATATGTACTATAAACTCCCTCTTTTTGCGCCAGTTCACAACTGGCCTCTAATGCTCC 3014292 Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGC--AATCGGGCCTCGGCGCTCTCGTAC 138861 || || ||||||||| || || || || || ||| | | || | || || || Sbjct 3014293 GTAATATATAGTTTCGAAGATTTGTTGGTTAAGTTTAATTG--CTTCTTCACTTTCATAT 3014350 Query 138862 GGCATGCGGAGCATCGTG--AACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919 || ||||| | || || || | || || | |||||||| || | || | ||| | Sbjct 3014351 GGAATGCGCA--ATAGTACAAATGTATCAGCTAAACCTTGCACTCCAATACCTATAGGTC 3014408 Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTT 138979 || |||| || || ||||| | | || ||| | || ||||| || |||| Sbjct 3014409 TGTGTCGCATGTTAGAGTTCTTTGCTTCAGGCACTGGGTAAAAATTAACATCAATAATTT 3014468 Query 138980 TGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAA-TCGTATGTG 139038 | || | ||| | || | ||| || | |||| | | || ||| | |||||| Sbjct 3014469 TATTAAGGTTTTGTGTGATCGTCTTTGTAACTT-CTTTCAACTTTGTAAAGTTGTATGTT 3014527 Query 139039 CCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCAC 139098 || || || | |||||| |||| | ||| || |||| || || Sbjct 3014528 ------TTATCTTCA------TTGACAAACCTGTTTAATGCAATTGAAGCTAAATTACAA 3014575 Query 139099 ACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTG 139158 || || ||||| || | |||| || |||||||| | ||||||||||| || || Sbjct 3014576 ACTGCAACTTCATCTGCTGAAGTGTACTCAACAATTTCTGTGCACAAATTACTGCATTTA 3014635 Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218 || || || | ||||| |||||| ||||||| |||||| | ||||||||| ||||| || Sbjct 3014636 ATTGTGCCAAGATTTTTTTGATTACTTTTTCTGTTACATGAATCTTTGTACAGCATGTAT 3014695 Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATT 139278 |||||||| ||||||||||||| ||||| || ||| | || || |||| | | | Sbjct 3014696 GGTGTGCCTGTTTCCACTTGTGCTTCTATTATTGCTTTCCATAATTCTTGAGCTCGGACT 3014755 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCG 139338 || || | || || | || || ||||| || | | | || ||| ||| || Sbjct 3014756 TGCTTAACAAATCTTTTTTCCTGTTCATATTTTTCATACAATGCTTCAAATTCTTCTCCC 3014815 Query 139339 TAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCC 139398 | |||| |||| | | || | | ||||||||| | ||| | | | ||| | Sbjct 3014816 CAACAATCAGCAAGACCCGGGCAATCATGAGGACACATTA--GAC--TCCACATTTCATC 3014871 Query 139399 TT----GACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGC 139454 || || ||| |||| || | ||| || ||||| || || | | || || | || Sbjct 3014872 TTTTTCAACCCGCTTCATAAATAAATCTGGGATCCATAAGGCATAAAATAATTCTCTTGC 3014931 Query 139455 CTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCG 139512 ||| | ||||| || | || ||||| | | || |||||||| |||| | Sbjct 3014932 --TCTGACCTCTTCTTTGCCAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAGAG 3014989 Query 139513 TGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGT---TTGCCACCTTGATCGACG 139569 ||||| ||||| || || || || | ||| ||| ||| ||||| ||||| || || Sbjct 3014990 TGCCAAGGTTCAAGGTAAATAGCGAATGCTCCTGGTCGTTTGTTGCCTCCTTGGTCAACA 3015049 Query 139570 TGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTG 139629 | | | | ||||||| | || | |||||| ||| | || || | | || || Sbjct 3015050 TACCTGGCTGTATTATTGTACACTCTCAACATTGGCACAAGGCCATTGGAAACACCATTA 3015109 Query 139630 G----TGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCC 139685 | ||||| ||| || || || | || | |||||||| | || || || Sbjct 3015110 GTACCTGCTATATATGTACCTTTT----GCCCTGATGCAATGTACATGAAGTCCTATACC 3015165 Query 139686 GCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCT 139745 || || ||||||| |||| | || | || ||| || |||||||| ||||| Sbjct 3015166 ACCAGCAGATTTGGAGATTAGGGCACATTGTTTTAGTGTGTCATATATACCCTCAATGCT 3015225 Query 139746 GTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGC 139805 ||| || | ||| | | || ||||| || || | ||| ||| | || |||| | Sbjct 3015226 GTCATCTTTCATAGCTATGAGGAAGCAAGAAGATAATTGTGGTCTTGGAGTTGCGGCGGA 3015285 Query 139806 AAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTC-GACATCAATTCGTACGTTTCGA 139864 ||||| || ||||| || || ||||| || | |||| |||| ||| | ||| ||||| | Sbjct 3015286 AAACAATGTGGGACTGGCATGAGTGAA-ATATTTTTCAGACAACAAATTGTAAGTTTCAA 3015344 Query 139865 TGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 | || |||| || || ||||| || | ||||||| |||||||||||| ||| Sbjct 3015345 TAGCTGCATCAATGTCTTCACCATGGATTCCAATTGAGACTCTCATCAGCATATGCTGG 3015403 Score = 167 bits (184), Expect = 2e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | ||||| || || |||||||| || ||| | || || |||||| Sbjct 2710292 ACAATGCAGATCTTCGTAAAAACCCTTACGGGTAAAACCATAACGTTAGAGGTTGAAGCC 2710351 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | |||| |||||| || || ||||||||||| || || || || ||| Sbjct 2710352 TCTGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCACCAGAT 2710411 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTA 24879 || ||| | |||||||| ||||| |||||| |||| || | || ||| |||| || || Sbjct 2710412 CAGCAAAGATTGATCTTCGCCGGCAAACAGTTGGAAGA-TGGACGTACATTGTCCGACTA 2710470 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || |||||||||||||| |||||||||||| | | || ||||| Sbjct 2710471 CAACATCCAGAAGGAATCGACACTTCACTTGGTGTTGAGGCTTCGAGGAGG 2710521 >seq3133 Length=7630298 Score = 214 bits (236), Expect = 2e-50 Identities = 584/883 (66%), Gaps = 25/883 (3%) Strand=Plus/Minus Query 56299 ACTCCGGTCCAACCTCTGCCGTACATGGCGACACCGAGCACTATCTTGTTCGGCTTTACG 56358 || |||||||| || | |||||||| || ||||| | ||| ||||| || || || || Sbjct 1022488 ACACCGGTCCAGCCGCGTCCGTACATAGCTACACCCACCACAATCTTCTTAGGGTTGACA 1022429 Query 56359 CCCTGCTGGAGGAGAGCGTGCACAGCGAAATCTGTCGTATATCGTTCTGCCTT---GTTC 56415 || || || | | | |||| | || || || || || ||| ||| |||| Sbjct 1022428 CCTTGAGCAAGCAAATATTTCACACCAAAGTCAGTTGTGTAAGTTTC---CTTAGGGTTC 1022372 Query 56416 CATTCGGGCGCGTAAACGTTCGTATGGTAGCCCAA---ATCCGAGTTGGACCAAGCGCCT 56472 || |||| ||||||| || || | || | ||| ||| ||||| |||||| Sbjct 1022371 CAAGCGGGAGCGTAAAGCGGAGTCTGATGACCGAGGGTATC---GTTAGACCAGGCGCCT 1022315 Query 56473 TTGAAATCGTAATTCATCAAAAATATTTTGTCAAGATACGTTTGCGCCTCGTCGTAATCG 56532 ||||| |||||| |||| | || || | ||| | ||| | || ||||| ||||||| Sbjct 1022314 TTGAAGTCGTAACTCATAAGGAAGATGTGGTCCATGTACTTCTGAGCCTCACTGTAATCG 1022255 Query 56533 ACGACGGCTATCTTATCGTATCCCGCGCTTATCGCGCTCGTGAGTTGGAATTTACGACCC 56592 || || |||||||| |||| || || || || || || | | |||| ||| Sbjct 1022254 ACAACTTGAATCTTATCCCATCCAGCACTAATAGCAGAGGTCAGCTCGTATTTCTTACCG 1022195 Query 56593 GTTTCGATCTCCAACTGGTCG---AGCATATGTCTCAACTCCTTCAACAGAATCA-CATA 56648 || || || | ||||| | ||| | | ||| ||||||| | | ||| | || Sbjct 1022194 GTCTCT---TCGGAAAGGTCGTTCAACATTTCACGCAATTCCTTCATTA-ATTCAACGTA 1022139 Query 56649 AGTCGACCCGTCGTGTGCTGGATCACCTAACAGGGGATTGGCGCCTTTGCCACCCGGAAA 56708 | ||||| | || ||| || | ||||| || || || || || || || Sbjct 1022138 AACATCTCCGTCCT-TG--GGACTGCCAAGGTCTGGATTAGCTCCCTTACCGCCAGGGAA 1022082 Query 56709 CTCCCAGTCGATGTCGACTCCATCGAAGAATTTCCACGTTAGTAGAAACTCACGAACGGA 56768 ||||| ||||| || || || |||||||| ||||| || | || || || || || Sbjct 1022081 TTCCCAATCGATATCTACACCGTCGAAGAACTTCCATGTCTGAAGGAAATCTTTCACAGA 1022022 Query 56769 ATCGATGAATATTTGACGTTTCGTGTTGTCGTGTAAA-AAGTAAAACGGATCCGAGAGTG 56827 ||| | ||| | | ||| ||||| ||| || ||| | || ||||| | || | Sbjct 1022021 ATCCACGAAGCGATCTCTCTTCTCTTTGTC-TGTGAAGAAGAAGAAGGGATCTGCAAGAG 1021963 Query 56828 TCCAACCGCCTATCGACGGGAGCACTTTCAGATGCGGGTTCGCCTTTTTGATAGCCATTA 56887 |||| || || || || || || | ||| || | || | || | ||| | || ||| | Sbjct 1021962 TCCAGCCACCGATGGAAGGTAGGATTTTAAGGTCAGGCCTGGCTTGTTTAAGAGACATCA 1021903 Query 56888 TCTGCCCGAAATTGCCCTTGTACGGTTCGTTCCAAGCGGACACTCCTTTTTGTGGTTTCT 56947 ||| || || ||||| ||||| || || ||||| | || | || |||||||| |||| Sbjct 1021902 GCTGACCAAAGTTGCCTTTGTATGGCTCATTCCAGGAAGAAAGACCCTTTTGTGGCTTCT 1021843 Query 56948 GTAGTGCGGCCCACGGATCGTGTATGGACACCTTGAAATCAGCACGATTCGAACACGAGC 57007 | || || |||||||||||||| || || || |||||||| | || || || | Sbjct 1021842 GAAGAGCAGCCCACGGATCGTGAATTGAAACTTTGAAATCTTCGCGGCCGCTGCATGATC 1021783 Query 57008 GTTGCAACGCTTCGAAACTACCCGTGATCGTTTTGAGACTATCGTTGATGCCGTCGCCGC 57067 |||| | |||| |||||| || ||| || | ||| ||||||||||| ||||| | Sbjct 1021782 GTTGAAGAGCTTGGAAACTGCCTTCGATTTCCTTCAAACTGTCGTTGATGCCATCGCCTC 1021723 Query 57068 CACAGATCGGTATGAAACCGTATAAGAGATGCGACAGATTGGGCACTGGCACCTTGTCGG 57127 | || || || || |||||||| || ||||| | |||||| || | ||| || || Sbjct 1021722 CGCAAATTGGAATAAAACCGTACAAAAGATGAGTCAGATTAGGAATTGGTACACGATCAA 1021663 Query 57128 CTGCAAAATTCCTACCGTATACGCCCCATTCGACGAAATATGC 57170 | | || || || ||| || |||||||| ||||| || || Sbjct 1021662 CAGGGAATTTTCTTGGGTAGACACCCCATTCAACGAAGTACGC 1021620 >seq2310 Length=6428792 Score = 150 bits (166), Expect = 2e-31 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || |||| || || || || || |||||||| ||| || || Sbjct 5746188 ATGCAGATCTTTGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746247 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| ||||| || || || || || Sbjct 5746248 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746307 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | ||||| ||||| |||||||| || ||| ||| | || | || ||||||| Sbjct 5746308 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCG-TACAC-TCTCCGATTATA 5746365 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || ||||| || || || || ||||||||||| || |||| || || Sbjct 5746366 ATATCCAAAAAGAGTCCACCCTCCACTTGGTGTTACGTCTGCGAGGTGG 5746414 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || ||||| || || | ||||| ||| || | Sbjct 5744820 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5744879 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| ||| ||||||||||| ||||| || || || || || Sbjct 5744880 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 5744939 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| || | ||| |||| || || ||| Sbjct 5744940 CAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGACGGGCGAACATTGTCTGACTACAAC 5744999 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| ||||| |||||||| | || |||| || || Sbjct 5745000 ATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGG 5745046 Score = 147 bits (162), Expect = 2e-30 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || |||| || || || || || ||||| || ||| || | Sbjct 5745732 ATGCAGATCTTTGTGAAGACCTTAACAGGAAAGACCATCACCCTCGAGGTGGAACCCTCT 5745791 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| ||||| || || || || || Sbjct 5745792 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5745851 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | ||||| ||||| |||||||| || ||| ||| | || | || ||||| | Sbjct 5745852 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCG-TACAC-TCTCCGATTACA 5745909 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||| |||||||| ||||| |||||||| | || ||||| || || Sbjct 5745910 ACATTCAGAAGGAATCCACACTCCACTTGGTACTACGTTTGCGAGGTGG 5745958 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || ||||| || || | ||||| ||| || | Sbjct 5745048 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5745107 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| ||| ||||||||||| ||||| || || || || || Sbjct 5745108 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 5745167 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | |||||||||||||| || |||||||| || || |||| |||| || || || Sbjct 5745168 CAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGA-CGGACGAACATTGTCTGACTACAA 5745226 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| ||||| |||||||| | || |||| || || Sbjct 5745227 CATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGG 5745274 Score = 143 bits (158), Expect = 2e-29 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || | || || ||||| || || | || || ||| || | Sbjct 5745276 ATGCAGATTTTTGTGAAGACCTTGACAGGCAAAACCATCACATTAGAGGTTGAACCCTCG 5745335 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| |||||| || || |||||||| ||||| || || || ||||| Sbjct 5745336 GACACAATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 5745395 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | |||||||| || || ||||| || ||| ||| | || | || || || | Sbjct 5745396 CAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGC-ACACTT-TCGGACTACA 5745453 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | || ||||||||||||||||||||||||||| | || ||| | |||||| Sbjct 5745454 ATATCCAAAAGGAATCGACACTACACTTGGTGCTTCGTTTGAGAGGAGGC 5745503 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || |||| || || || || || |||||||| ||| || || Sbjct 5746872 ATGCAGATCTTCGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746931 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| ||||| || || || || || Sbjct 5746932 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746991 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| ||||| |||||| |||||||| | | | || || || ||| Sbjct 5746992 CAACGTCTCATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTACACTCTCGGACTACAAC 5747051 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || |||||||| || ||||| |||||||| Sbjct 5747052 ATCCAAAAGGAGTCCACACTTCACTTGGT 5747080 Score = 132 bits (146), Expect = 4e-26 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || || || || || || ||| || | Sbjct 5746416 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTGGAACCCTCA 5746475 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | |||| | ||| || |||||||| ||||| || ||||| || || Sbjct 5746476 GACACCATTGAGAATGTTAAAGCCAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGACCA 5746534 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 |||||| | ||||| ||||| |||||||| || ||| ||| | || | || ||||| Sbjct 5746535 GCAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCG-TACAC-TCTCCGATTAC 5746592 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| |||||||| ||||| |||||||| | || |||| || || Sbjct 5746593 AACATTCAGAAGGAATCCACACTCCACTTGGTACTACGTCTGCGAGGTGG 5746642 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || | || || || || || || | || || ||| | | Sbjct 5745504 ATGCAAATTTTTGTTAAGACCTTGACTGGCAAGACCATCACATTGGAGGTTGAACCTTCA 5745563 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||||||||| || ||||| || || || || || Sbjct 5745564 GATACCATTGAGAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATCCCCCCAGACCAG 5745623 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 |||||| | ||||||||||| |||||| ||||||| | || ||| | || ||||| || Sbjct 5745624 CAACGTCTCATCTTTGCCGGTAAACAGTTGGAGGA-TGGACGTACACTCTCTGATTACAA 5745682 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| |||||||| ||||| |||||||| ||||| |||| || || Sbjct 5745683 CATTCAGAAGGAATCCACACTCCACTTGGTATTGCGTCTGCGAGGTGG 5745730 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || | || || || || || || | || || || | | Sbjct 5744591 GATGCAGATTTTTGTGAAGACCTTGACGGGCAAGACCATCACCTTGGAGGTGGAGCCTTC 5744650 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || ||||| ||||||||||| || || || || || || Sbjct 5744651 GGACACAATTGAAAATGTTAAGGCCAAGATTCAAGACAAAGAGGGCATCCCCCCAGACCA 5744710 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881 || | |||||||||||||| ||||||||||| || | || ||| |||| || || | Sbjct 5744711 GCAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGA-TGGACGCACATTGTCTGACTACA 5744769 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || |||||||| ||||| |||||||| | || |||| || || Sbjct 5744770 ACATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGG 5744818 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || ||||| ||||| | ||||| ||| | | Sbjct 5745960 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATTACCTTAGAAGTCGAACCTTCT 5746019 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 5746020 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746079 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | |||||||| ||||| |||||||| ||||| | || ||| | || || || || Sbjct 5746080 CAGAGATTGATCTTCGCCGGCAAACAGCTAGAGGA-TGGACGTACACTCTCTGACTACAA 5746138 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| ||||| || || || || |||||||| |||| Sbjct 5746139 CATCCAAAAAGAGTCCACCCTCCACTTGGTACTGCG 5746174 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || ||||| ||||| | ||||| ||| | | Sbjct 5746644 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATTACCTTAGAAGTCGAACCTTCT 5746703 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || ||||| || || || || || Sbjct 5746704 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGATAAGGAAGGCATCCCCCCAGACCAG 5746763 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | |||||||| ||||| |||||||| ||||| | || ||| | || || || || Sbjct 5746764 CAGAGATTGATCTTCGCCGGCAAACAGCTAGAGGA-TGGACGTACACTCTCTGACTACAA 5746822 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| ||||| || || || || |||||||| |||| Sbjct 5746823 CATCCAAAAAGAGTCCACCCTCCACTTGGTACTGCG 5746858 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || | || || || | | Sbjct 5747100 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 5747159 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | |||| | ||| ||||||||||| ||||| || || || || || Sbjct 5747160 GACACCATCGAGAATGTTAAAGCCAAA-ATCCAAGACAAGGAAGGTATCCCCCCAGACCA 5747218 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| | ||||| ||||| |||||| |||||||| | | | || || || || Sbjct 5747219 GCAACGTCTTATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTACACTCTCGGACTACAA 5747278 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| || || || ||||||||| | || | ||||| |||| Sbjct 5747279 CATCCAGAAGGAGTCTACTCTGCACTTGGTGCTCCGTCTTCGCGGCGGCG 5747328 >seq5346 Length=541963 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || |||| || || || || || | ||||||||| | | Sbjct 231237 ATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTCT 231296 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | |||||| ||||||||||| ||||||||||| ||||| || ||| Sbjct 231297 GATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCAA 231356 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| |||| || || | | || |||||||| Sbjct 231357 CAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTATAAT 231416 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||| |||||||| ||||| || |||| | ||||| Sbjct 231417 ATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGG 231463 >seq2115 Length=629047 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || |||| || || || || || | ||||||||| | | Sbjct 361007 ATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTCT 360948 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | |||||| ||||||||||| ||||||||||| ||||| || ||| Sbjct 360947 GATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCAA 360888 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| |||| || || | | || |||||||| Sbjct 360887 CAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTATAAT 360828 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||| |||||||| ||||| || |||| | ||||| Sbjct 360827 ATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGG 360781 >seq1358 Length=322254 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 24749 GAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGA 24808 ||||||||| | | || || | || | |||||| ||||||||||| || |||||| Sbjct 13 GAAGTAGAACCTTCTGATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAGGAAGGA 72 Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || ||||| || ||||| | | || ||||| || ||||| |||| || || | Sbjct 73 ATCCCTCCAGACCAACAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACT 132 Query 24869 ATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGA 24928 | || |||||||| |||||||| ||| |||||||| ||||| || |||| | ||| Sbjct 133 TTATCTGATTATAATATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGA 192 Query 24929 GG 24930 || Sbjct 193 GG 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449866264632160