Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq2352 87.8 3e-12 >seq2352 Length=6838751 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 140565 GGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTAAACCG 140624 || || || || || || ||||||||||| | | | || ||||| ||||||||| Sbjct 5362046 GGTTCACCAGCTTACATATCTCCGGATGTGTTAATGTGCAAGCCATACCATGGTAAACCG 5362105 Query 140625 TCTGATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATTTCCATTT 140684 || || |||||||| ||||| || |||||||| ||||||| ||| ||||| ||||| Sbjct 5362106 TCAGACATGTGGGCACTTGGTGTTGTCTTGTATACAATGTTGTATGGACAATTCCCATTC 5362165 Query 140685 TATGATGC--GTCTCCAACAGAGCTCTTTAG 140713 | ||| | ||||| ||| ||||||| || Sbjct 5362166 TGCGATACTAGTCTC--ACACAGCTCTTCAG 5362194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704533325835840