Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1114 280 3e-70 seq1673 138 3e-27 seq1390 129 1e-24 seq4077 105 2e-17 seq1251 104 6e-17 seq1248 104 6e-17 seq769 102 2e-16 seq1838 100 7e-16 seq4120 95.1 3e-14 >seq1114 Length=8361563 Score = 280 bits (310), Expect = 3e-70 Identities = 522/763 (68%), Gaps = 5/763 (1%) Strand=Plus/Minus Query 110397 ATTGGTATTCATGGACATGATATTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAA 110456 ||||| || ||||| | || ||| | || | ||||||| ||| || | || | || Sbjct 3015378 ATTGGAATCCATGGTGAAGACATTGATGCAGCTATTGAAACTTACAATTTGTTGTCTGAA 3015319 Query 110457 AAGAAAGCTATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTG 110516 || | | |||||| | ||| || | ||| ||| | |||| || |||||| Sbjct 3015318 AAATATTTCACTCATGCCAGTCCCACATTGTTTTCCGCCGCAACTCCAAGACCACAATTA 3015259 Query 110517 GCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTT 110576 |||||||||| || ||| || || ||||| ||||| ||||| ||||| | || Sbjct 3015258 TCTTCTTGCTTCCTCATAGCTATGAAAGATGACAGCATTGAGGGTATATATGACACACTA 3015199 Query 110577 AAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATT 110636 ||| || ||| || || || ||| |||| || || || |||| || ||| || Sbjct 3015198 AAACAATGTGCCCTAATCTCCAAATCTGCTGGTGGTATAGGACTTCATGTACATTGCATC 3015139 Query 110637 CGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATG 110696 | ||||||| || |||| ||| | || |||| ||| | ||| ||||| |||||| Sbjct 3015138 AGGGCAAAAGGTACATATATAGCAGGTACTAATGGTGTTTCCAATGGCCTTGTGCCAATG 3015079 Query 110697 TTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGC 110753 || ||||| | ||| | || || | ||||| | ||||| || || | || || Sbjct 3015078 TTGAGAGTGTACAATAATACAGCCAGGTATGTTGACCAAGGAGGCAACAAACGACCAGGA 3015019 Query 110754 TCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGT 110813 |||| ||||| || || ||||||||||| || ||| | ||||| || ||||| || Sbjct 3015018 GCATTCGCTATTTACCTTGAACCTTGGCACTCTGATGTTTTTGAGTTTTTAGATCTGAAA 3014959 Query 110814 AAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873 || ||| || ||||| |||||| | || ||||||||||| | ||||| || Sbjct 3014958 AAGAATACTGGCAAAGAAGAGGTCAGAGCAAGAGAATTATTTTATGCCTTATGGATCCCA 3014899 Query 110874 GATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGT 110933 |||||||| ||||| || ||| || || ||| |||||| ||| |||||||||||| | Sbjct 3014898 GATTTATTTATGAAGCGGGTTGAAAAAGATGAAATGTGGAGTCTAATGTGTCCTCATGAT 3014839 Query 110934 TCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAA 110993 | || ||||| ||||| | ||| |||| ||||||| | || |||||||||||| Sbjct 3014838 TGCCCGGGTCTTGCTGATTGTTGGGGAGAAGAATTTGAAGCATTGTATGAAAAATATGAA 3014779 Query 110994 AAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAA 111053 | ||| | ||| || ||| | | |||||||||| | ||| ||| | ||| Sbjct 3014778 CAGGAAAAAAGATTTGTTAAGCAAGTCCGAGCTCAAGAATTATGGAAAGCAATAATAGAA 3014719 Query 111054 TCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATC 111112 ||||||| ||||| || || || || || |||| |||||| ||| | || | ||| Sbjct 3014718 GCACAAGTGGAAACAGGCACACCATACATGCTGTACAAAGATTCATGT-AACAGAAAAAG 3014660 Query 111113 TAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||||| ||| | || |||||||| | |||||||||||| Sbjct 3014659 TAATCAAAAAAATCTTGGCACAATTAAATGCAGTAATTTGTGC 3014617 >seq1673 Length=160240 Score = 138 bits (152), Expect = 3e-27 Identities = 551/854 (65%), Gaps = 24/854 (3%) Strand=Plus/Minus Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATC----TGTTGCGGC 131487 || || || |||||| |||||||| | | | ||||| || || | |||| | Sbjct 45563 CTTTTCCCTATTAAATATCACGATATCTGGAAGATGTACAAACAAGCCGAATGTT----C 45508 Query 131488 CTTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAAC 131547 || ||||| | |||||| | ||| | | ||| | |||||||| | ||||| Sbjct 45507 TTTTTGGACCGCTGAAGAAGTTGATCTTTCAGCCGATTTATATGATTGGAATTCTTTAAC 45448 Query 131548 CTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCAT 131607 |||||| | | |||||||| | |||||||||| ||||| | |||||| || Sbjct 45447 ACCAGATGAAAGATACTTTGTTTCACATATTCTTGCATTTTTCGCTGCTTCTGATGGTAT 45388 Query 131608 TGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGAT-ATTCCTGAAGTAACAT 131666 ||| | | ||||||||| | || | | || || | | ||| || | || || Sbjct 45387 TGTAAATATGAATCTTGTTGAAAGGTTT-TCCGAGGAAGTCACCATTTTAGAGGCAAAAT 45329 Query 131667 CGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGA 131726 || || ||| || | | | | ||| ||| ||| || |||||||| ||| | | Sbjct 45328 GTTTTTATGGATTCCAGGTAGTTATCGAAAATATCCATTCTGAAATGTATTCTTTACTTA 45269 Query 131727 TTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAAT 131786 | || | | ||| || || || |||||| | | || ||||| |||| | | Sbjct 45268 TAGATACGTATATTAGTGATCCGGACGAAAAAAATCATCTTCTTAATGCTATAAACACAA 45209 Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 | || | ||||||||||| || || |||||| | ||||||||| ||||| | ||| Sbjct 45208 TACCATCTATTAAAAAGAAGGCTGATTGGGCTTTGAAATGGATTAAAGATAAAAAATCTA 45149 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 |||| |||| ||| || | || ||||||||||||||||| || |||||| || || | Sbjct 45148 CTTTTGCTACCAGAGTTATCGCATTTGCTTGTGTTGAAGGAATTTTCTTTAGTGGAGCAT 45089 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 | | | ||||| ||| | ||||| | || | |||||||| | || || || ||| Sbjct 45088 TTGCTTCGATCTTCTGGTTAAAGAAAAGAGGTCTCATGCCTGGTTTGTCGTTTTCAAATG 45029 Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAAT 132026 || | || ||||||||| ||||| || |||||| | || | || | | | Sbjct 45028 AACTTATTAGCCGAGATGAAGGTCTGCATTGCGAGTTTGCT-TGTTTGT---TAAATAGT 44973 Query 132027 TTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGATATCG 132086 | || || || | ||| |||| || || | | | || ||||| | |||| Sbjct 44972 TATCTTATCAA-TAAATG-CGATAAGATCAAGGATATCGTTGTTGAGGCAGTAAAAATCG 44915 Query 132087 AGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAA-TGCTGACTCT 132145 | | || ||| | | ||| ||| || ||| | ||||| ||||| ||| ||| | Sbjct 44914 AACAAGAATTTTTAAGTGAAAGTTTACCAGTTAATCTTATTGGAATGAATTGCAAACT-T 44856 Query 132146 ATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTAATTAACCAACTTGGATATTCCAAG 132205 ||| | || |||||||| || || || | ||| | | | |||||| | ||| Sbjct 44855 ATGTGCAATTATATTGAATTTGTAGCCGACAGATTATTGATAAACCTTGGAGAAGATAAG 44796 Query 132206 ATTTATAACAC--CCAAAACCCCTATACA-TGGATGGAGTCAATTTCGCTTGAAGGTAAA 132262 ||||| ||||| |||| ||| | | | ||||| ||||| |||| |||||| Sbjct 44795 ATTTACAACACAGCCAA---TCCTTTCGATTTTATGGAAAATATTTCACTTGTTGGTAAA 44739 Query 132263 ACGAACTTCTTCGA 132276 || ||||||||||| Sbjct 44738 ACAAACTTCTTCGA 44725 >seq1390 Length=76047 Score = 129 bits (142), Expect = 1e-24 Identities = 549/854 (64%), Gaps = 24/854 (3%) Strand=Plus/Plus Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATC----TGTTGCGGC 131487 || || || |||||| |||||||| | | | ||||| || || | |||| | Sbjct 54223 CTTTTCCCTATTAAATATCACGATATCTGGAAGATGTACAAACAAGCCGAATGTT----C 54278 Query 131488 CTTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAAC 131547 || ||||| | |||||| | ||| | | ||| | |||||||| | ||||| Sbjct 54279 TTTTTGGACCGCTGAAGAAGTTGATCTTTCAGCCGATTTATATGATTGGAACTCTTTAAC 54338 Query 131548 CTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCAT 131607 |||||| | | |||||||| | |||||||||| ||||| | |||||| || Sbjct 54339 ACCAGATGAAAGATACTTTGTTTCACATATTCTTGCATTTTTCGCTGCTTCTGATGGTAT 54398 Query 131608 TGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGAT-ATTCCTGAAGTAACAT 131666 ||| | | ||||||||| | || | | || || | | ||| || | || || Sbjct 54399 TGTAAATATGAATCTTGTTGAAAGGTTT-TCCGAGGAAGTCACCATTTTAGAGGCAAAAT 54457 Query 131667 CGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGA 131726 || || ||| || | | | | ||| ||| ||| || |||||||| ||| | | Sbjct 54458 GTTTTTATGGATTCCAGGTAGTTATCGAAAATATCCATTCTGAAATGTATTCTTTACTTA 54517 Query 131727 TTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAAAT 131786 | || | | ||| || || || |||||| | | || ||||| |||| | | Sbjct 54518 TAGATACGTATATTAGTGATCCGGACGAAAAAAATCATCTTCTTAATGCTATAAACACAA 54577 Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 | || | ||||||||||| || || ||||| | |||||||| |||| | ||| Sbjct 54578 TACCATCTATTAAAAAGAAGGCTGATTGGGCATTGAAATGGATAAAAGACAAAAAATCTA 54637 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 |||| |||| ||| || | || ||||||||||| ||||| || |||||| || || | Sbjct 54638 CTTTTGCTACCAGAGTTATCGCATTTGCTTGTGTCGAAGGAATTTTCTTTAGTGGAGCAT 54697 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 | | | ||||| ||| | ||||| | || | |||||||| | || || || ||| Sbjct 54698 TTGCTTCGATCTTCTGGTTAAAGAAAAGAGGTCTCATGCCTGGTTTGTCGTTTTCAAATG 54757 Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAAT 132026 || |||| ||||||||| ||||| ||||||||| | || | || | | | Sbjct 54758 AACTCATTAGCCGAGATGAAGGTCTGCATTGCGAATTTGCT-TGTTTGT---TAAATAGT 54813 Query 132027 TTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGATATCG 132086 | || || || | ||| |||| || || | || | || ||||| | |||| Sbjct 54814 TATCTTATCAA-TAAATG-CGATAAGATCAAGGATATTGTTGTTGAGGCAGTAAAAATCG 54871 Query 132087 AGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAA-TGCTGACTCT 132145 | | || ||| | | ||| ||| ||| ||| | ||||| ||||| ||| ||| | Sbjct 54872 AACAAGAATTTTTAAGTGAAAGTTTACCTGTTAATCTTATTGGAATGAATTGCAAACT-T 54930 Query 132146 ATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTAATTAACCAACTTGGATATTCCAAG 132205 ||| | || |||||||| || || || | ||| | | | ||||| | ||| Sbjct 54931 ATGTGCAATTATATTGAATTTGTAGCCGACAGATTATTGATAAACCTTGGGGAAGATAAG 54990 Query 132206 ATTTATAACAC--CCAAAACCCCTATACA-TGGATGGAGTCAATTTCGCTTGAAGGTAAA 132262 ||||| ||||| |||| ||| | | | ||||| ||||| |||| |||||| Sbjct 54991 ATTTACAACACAGCCAA---TCCTTTCGATTTCATGGAAAATATTTCACTTGTTGGTAAA 55047 Query 132263 ACGAACTTCTTCGA 132276 || |||||||| || Sbjct 55048 ACAAACTTCTTTGA 55061 >seq4077 Length=533617 Score = 105 bits (116), Expect = 2e-17 Identities = 146/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 || ||| | ||||| || || ||||||||||||||||||| ||| ||||| || | Sbjct 214013 TTTAATCGACAACCTTCTCTTCATAAAATGTCTATGATGGGTCACAAAGTTCGTGTGATG 214072 Query 305396 TCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGAT 305455 || ||| ||||| |||||| | |||| | | ||||||||||| ||||||||| Sbjct 214073 GAAGGGAAGACTTTTCGTTTAAATTTGAGTGTCACTTCTCCTTATAATGCCGATTTTGAT 214132 Query 305456 GGAGATGAAATGAATATGCATGTACCTC--AATCAAAGGTTACAATGACTGAATTATCAG 305513 ||||||||||||||| | ||| | || | ||| | | || || || | |||||| || Sbjct 214133 GGAGATGAAATGAATCTTCATATGCCACAAAATTACA-ATTCCATTG-CAGAATTAGAAG 214190 Query 305514 AAATATGTTCTGTATCAAAAC 305534 |||| ||| ||| | |||| Sbjct 214191 AAATTTGTATGGTACCCAAAC 214211 >seq1251 Length=283413 Score = 104 bits (114), Expect = 6e-17 Identities = 350/539 (65%), Gaps = 16/539 (3%) Strand=Plus/Minus Query 279805 AGAATTTATTGATAAAGAACTGATCCATTTTTCTAATTATGATGTTCATCGTTCTATTCC 279864 ||| |||||| || |||| |||| | ||||| | |||| | | | || ||||| Sbjct 60894 AGATTTTATTAATCGAGAATTGATTCTATTTTCAATGGCTGATAATATTAGATCAATTCC 60835 Query 279865 TCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAG 279924 || |||| ||||| | |||||| ||| | || || |||| ||||||| ||||| Sbjct 60834 AAATGTAATTGATGGACTTAAACCTGGACAAAGAAAAGTTTTATTTGGTTGTTTTAAAAG 60775 Query 279925 AAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGG 279984 |||||| ||| | || || || |||| ||||||| || |||||||| | | Sbjct 60774 AAAATTATATTCTGAAGCTAAAGTAGCACAATTAGTAGGTTATATTGCAGAACATACTGC 60715 Query 279985 TTATCATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTAT 280044 |||| || ||||||| || ||| | |||| |||| | | || ||||||||| | Sbjct 60714 TTATAGACATGGTGAAGTATCACTTGCTTCTACTATAGTAGCTTTAGCTCAAGATTTTGT 60655 Query 280045 GGCTTCAAACAACTTAAATCTGCTTTCA--CCAAATGGTCAATTTGGTTCTCGTATTCAC 280102 | || || || | ||| | ||| | || ||||||||||| |||||| | || Sbjct 60654 TGGATCTAATAATATTAATAT--TTTAATGCCTAATGGTCAATTCGGTTCTAGACTTATG 60597 Query 280103 AATGGAAAAGATCATGGTAGTGCTCGTTACATACATACATGTCTTTCAGATATTAC--AA 280160 || |||||| | ||||| |||||| || ||| ||||| | || || | Sbjct 60596 GGAGGTAAAGATTGTTCTAGTGTTCGTTATATTTTTACTGAACTTTCTAAAATAACCAGA 60537 Query 280161 ACAAGTTATTTATCAA--TTCTGATAATG--CTTCATTAGAGTGGCTAGAGGATGATGGT 280216 |||| || || || || | |||| || ||| |||| || || || | Sbjct 60536 ACAA-TTTTTCATGAAAGTGATGATCTTGTACTTAATTA-----TTTAATTGAAGAAGAA 60483 Query 280217 CTTGCTATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTAATGGTGCT 280276 || | |||||| |||||||| ||| ||||| || ||| | | || |||||| || Sbjct 60482 AAATCTGTAGAACCACAATATTATGTTCCTATTATTCCAATGTTATTAGTAAATGGTTCT 60423 Query 280277 CAAGGAATTGGAACAGGTTATTCTACATCTATCCCAATGTACAATCCAATTGATATTAT 280335 | || ||||| || |||| |||| ||| || | || ||||| | ||| |||| Sbjct 60422 GATGGTATTGGTACTGGTTGGAGTACAAATATTCCTAATTATAATCCTTTAGATCTTAT 60364 >seq1248 Length=515940 Score = 104 bits (114), Expect = 6e-17 Identities = 319/487 (66%), Gaps = 16/487 (3%) Strand=Plus/Minus Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916 || ||||| || |||| ||||| | |||||| ||| | || || |||| ||||| Sbjct 55994 TCAATTCCGAATGTAATTGATGGACTTAAACCTGGACAAAGAAAAGTTTTATTTGGTTGT 55935 Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976 || |||||||||||| ||| | || || || |||| ||||||| || ||||| Sbjct 55934 TTTAAAAGAAAATTGTATTCAGAAGCTAAAGTAGCACAATTAGTAGGTTATATTGCAGAA 55875 Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAA 280036 ||| ||| |||| || ||||||| || ||| | |||| |||| | | || ||| Sbjct 55874 CATACAGCTTATAGACATGGTGAAGTATCACTTGCTTCTACTATAGTAGCTTTAGCTCAA 55815 Query 280037 GATTTTATGGCTTCAAACAACTTAAATCTGCTTTCA--CCAAATGGTCAATTTGGTTCTC 280094 |||||| | | || || || | ||| | ||| | || ||||||||||| |||||| Sbjct 55814 GATTTTGTTGGATCTAATAATATTAATAT--TTTAATGCCTAATGGTCAATTCGGTTCTA 55757 Query 280095 GTATTCACAATGGAAAAGATCATGGTAGTGCTCGTTACATACATAC--ATGTCTTTCAGA 280152 | || || |||||| | |||||||||||| || ||| | ||| | | | Sbjct 55756 GACTTATGGGAGGTAAAGATTGTTCTAGTGCTCGTTATATTTTTACTGAACTCTCTAAAA 55697 Query 280153 TATTACAAACAAGTTATTTATCAA--TTCTGATAATG--CTTCATTAGAGTGGCTAGAGG 280208 || ||||| || || || || | |||| || ||| |||| || | Sbjct 55696 TAACCAGAACAA-TTTTTCATGAAAGTGATGATCTTGTACTTAATTA-----TTTAATTG 55643 Query 280209 ATGATGGTCTTGCTATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTA 280268 | || | || | |||||| |||||||| ||| ||||| || ||| | | || | Sbjct 55642 AAGAAGAAAAATCTGTAGAACCACAATATTATGTTCCTATTATTCCAATGTTATTAGTAA 55583 Query 280269 ATGGTGCTCAAGGAATTGGAACAGGTTATTCTACATCTATCCCAATGTACAATCCAATTG 280328 ||||| || | || ||||| || |||| |||| ||| || | || ||||| | | Sbjct 55582 ATGGTTCTGATGGTATTGGTACTGGTTGGAGTACAAATATTCCTAATTATAATCCTTTAG 55523 Query 280329 ATATTAT 280335 || |||| Sbjct 55522 ATCTTAT 55516 >seq769 Length=131207 Score = 102 bits (112), Expect = 2e-16 Identities = 427/663 (64%), Gaps = 26/663 (4%) Strand=Plus/Minus Query 304880 AACAA--TTTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGC 304937 ||||| |||||||| |||| | || || ||||| || || || ||| |||| | Sbjct 74283 AACAACTTTTACAATTTCATGTGGCTACTTTAATAGACAACGACATTAGTGGACAACCAC 74224 Query 304938 AGGCATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAG 304997 | || ||| | | ||| |||||||| || |||| || ||||||| || | Sbjct 74223 AAGCCCTTCAGAAAAGTGGTAGACCTTTGAAATCTATTTCTGCCCGACTTAAAGGAAAGG 74164 Query 304998 AGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAA 305057 | || ||| || |||| ||||| ||||| || | || || |||||||| || ||||| Sbjct 74163 AAGGACGTGTTAGAGGAAATCTTATGGGTAAGAGAGTAGACTTTAGTGCCAGGTCTGTAA 74104 Query 305058 TCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAA 305117 | || ||||| | | ||| ||| | ||| | || ||||| | ||| | ||| || Sbjct 74103 TTACTGCTGATGCCAATATTTCCCTTGAAGAAGTCGGGGTTCCTTTAGAAGTAGCTAAAA 74044 Query 305118 AACTAACATTTCCAGAGAAAGTTAACGAGAAAAATATT-AAACATTTGAGACGTTGTGTT 305176 | || ||||||||||| ||| || ||| ||| ||| || | || || Sbjct 74043 TCCACACGTTTCCAGAGAAGATTACGCCTTTCAACATTGAAAAATTGGAAAAATTA-GTG 73985 Query 305177 CTTAATGGAAATAGCAAGTATCCAGGTGCTCGTGCTGTTATAA-AACACAAGCA-AAAGA 305234 |||||| || | |||| ||||| ||| | || |||| |||| | | | ||||| Sbjct 73984 GCAAATGGACCTAACGAGTACCCAGGGGCTAATTACGTGATAAGAACAGACGGACAAAGA 73925 Query 305235 AGACAAT-ATCTTTGAACCATATCGATTTAAAACAATTCAGTAAAATGCTTGAAATTAAT 305293 | | | | ||| || ||| ||||| | || || | | || Sbjct 73924 ATTGATTTAAATTTTAATAGGGGAGATATAAAA----TTAG-AAGAGGGTT--------- 73879 Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353 |||||||| || || || | | || || | || ||| | ||||| || Sbjct 73878 -ATATTGTTGAAAGGCACATGCAGAATGGAGACACTATTTTATTTAATCGACAACCTTCT 73820 Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGA 305413 || ||||||||||||||||||| || ||||| || | || ||| || || Sbjct 73819 CTTCATAAAATGTCTATGATGGGCCACAAAGTTCGTGTGATGGAAGGGAAGACTTTCCGT 73760 Query 305414 TTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATG 305473 |||||| | |||| | | ||||||||||| |||||||||||||||||||||||| | Sbjct 73759 TTAAATTTGAGTGTCACTTCTCCTTATAATGCCGATTTTGATGGAGATGAAATGAATCTT 73700 Query 305474 CATGTACCTC--AATCAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGTATCAA 305531 ||| | || | ||| | | || || || |||||||| |||||| ||| ||| | | Sbjct 73699 CATATGCCACAAAATTACA-ATTCCATTG-CTGAATTAGAAGAAATTTGTATGGTACCCA 73642 Query 305532 AAC 305534 ||| Sbjct 73641 AAC 73639 >seq1838 Length=309293 Score = 100 bits (110), Expect = 7e-16 Identities = 419/650 (64%), Gaps = 26/650 (4%) Strand=Plus/Plus Query 304880 AACAA--TTTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGC 304937 ||||| |||||||| |||| | || || ||||| || || || ||| |||| | Sbjct 89587 AACAACTTTTACAATTTCATGTGGCTACTTTAATAGACAACGACATTAGTGGACAACCAC 89646 Query 304938 AGGCATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAG 304997 | || ||| | | ||| |||||||| || |||| || ||||||| || | Sbjct 89647 AAGCCCTTCAGAAAAGTGGTAGACCTTTGAAATCTATTTCTGCCCGACTTAAAGGAAAGG 89706 Query 304998 AGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAA 305057 | || ||| || |||| ||||| ||||| || | || || |||||||| || ||||| Sbjct 89707 AAGGACGTGTTAGAGGAAATCTTATGGGTAAGAGAGTAGACTTTAGTGCCAGGTCTGTAA 89766 Query 305058 TCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAA 305117 | || ||||| | | ||| ||| | ||| | || ||||| | ||| | ||| || Sbjct 89767 TTACTGCTGATGCCAATATTTCCCTTGAAGAAGTCGGGGTTCCTTTAGAAGTAGCTAAAA 89826 Query 305118 AACTAACATTTCCAGAGAAAGTTAACGAGAAAAATATT-AAACATTTGAGACGTTGTGTT 305176 | || ||||||||||| ||| || ||| ||| ||| || | || || Sbjct 89827 TCCACACGTTTCCAGAGAAGATTACGCCTTTCAACATTGAAAAATTGGAAAAATTA-GTG 89885 Query 305177 CTTAATGGAAATAGCAAGTATCCAGGTGCTCGTGCTGTTATAA-AACACAAGCA-AAAGA 305234 |||||| || | |||| ||||| ||| | || |||| |||| | | | ||||| Sbjct 89886 GCAAATGGACCTAACGAGTACCCAGGGGCTAATTACGTGATAAGAACAGACGGACAAAGA 89945 Query 305235 AGACAAT-ATCTTTGAACCATATCGATTTAAAACAATTCAGTAAAATGCTTGAAATTAAT 305293 | | | | ||| || ||| ||||| | || || | | || Sbjct 89946 ATTGATTTAAATTTTAATAGGGGAGATATAAAA----TTAG-AAGAGGGTT--------- 89991 Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353 |||||||| || || || | | || || | || ||| | ||||| || Sbjct 89992 -ATATTGTTGAAAGGCACATGCAGAATGGAGACACTATTTTATTTAATCGACAACCTTCT 90050 Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGA 305413 || ||||||||||||||||||| || ||||| || | || ||| || || Sbjct 90051 CTTCATAAAATGTCTATGATGGGCCACAAAGTTCGTGTGATGGAAGGGAAGACTTTCCGT 90110 Query 305414 TTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATG 305473 |||||| | |||| | | ||||||||||| |||||||||||||||||||||||| | Sbjct 90111 TTAAATTTGAGTGTCACTTCTCCTTATAATGCCGATTTTGATGGAGATGAAATGAATCTT 90170 Query 305474 CATGTACCTC--AATCAAAGGTTACAATGACTGAATTATCAGAAATATGT 305521 ||| | || | ||| | | || || || |||||||| |||||| ||| Sbjct 90171 CATATGCCACAAAATTACA-ATTCCATTG-CTGAATTAGAAGAAATTTGT 90218 >seq4120 Length=16292344 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/169 (73%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 305322 ATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATA 305381 |||||| |||| | ||||| ||||||| | || || || ||| |||||||| ||| | Sbjct 11797557 ATGATTTGGTTATATTCAACCGGCAACCTACCCTCCACAAGATGAGTATGATGGGTCACA 11797616 Query 305382 AAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG---CCTT 305438 || ||||| || || | | ||||| || | ||| | ||| ||||| |||| Sbjct 11797617 GGGTGAAAGTGCTACCTTGGTCAACATTCCGTATGAATTTGAGT---TGTACATCTCCTT 11797673 Query 305439 ATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 | ||||| ||||||||||| |||||||||||| | ||||| || || || Sbjct 11797674 ACAATGCTGATTTTGATGGTGATGAAATGAATCTACATGTTCCACAGTC 11797722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186728071950692