Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq3128 100 9e-18 seq2386 100 9e-18 seq937 100 9e-18 seq4120 98.7 3e-17 seq3133 98.7 3e-17 seq3117 98.7 3e-17 seq1114 98.7 3e-17 seq3345 86.0 2e-13 seq3110 86.0 2e-13 seq2520 80.6 8e-12 >seq3128 Length=5114887 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 338675 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 338616 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 338615 ATCCCGGGTTTCGGC 338601 >seq2386 Length=7418803 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 162287 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 162228 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 162227 ATCCCGGGTTTCGGC 162213 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 235517 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 235576 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 235577 ATCCCGGGTTTCGGC 235591 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 159089 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 159030 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 159029 CCGGGTTTCGGC 159018 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 159341 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 159400 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 159401 CCGGGTTTCGGC 159412 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 162016 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 162075 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 162076 CCGGGTTTCGGC 162087 >seq937 Length=3169944 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 493409 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 493468 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 493469 ATCCCGGGTTTCGGC 493483 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 486357 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 486298 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 486297 CCGGGTTTCGGC 486286 >seq4120 Length=16292344 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 7746869 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 7746928 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 7746929 CCGGGTTTCGGC 7746940 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 7756126 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 7756185 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 7756186 CCGGGTTTCGGC 7756197 Score = 96.9 bits (106), Expect = 1e-16 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 7413348 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 7413407 Query 2825 AACCCCGGGCTTCAGC 2840 | ||| || ||| || Sbjct 7413408 GATCCCTGGTTTCGGC 7413423 >seq3133 Length=7630298 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 3830629 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 3830688 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3830689 CCGGGTTTCGGC 3830700 >seq3117 Length=6198915 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1975956 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1975897 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1975896 CCGGGTTTCGGC 1975885 >seq1114 Length=8361563 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 3592618 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 3592559 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3592558 CCGGGTTTCGGC 3592547 >seq3345 Length=100855 Score = 86.0 bits (94), Expect = 2e-13 Identities = 68/77 (88%), Gaps = 5/77 (6%) Strand=Plus/Plus Query 2763 TTTATGGCTGAAGT-AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| || Sbjct 51168 TTTATGG--GAAGTTAGCTCAGT-GGGAGAGCATTAGACTGAAGATCTAAGGGTCCCGGG 51224 Query 2822 TTC-AACCCCGGGCTTC 2837 ||| | |||||| |||| Sbjct 51225 TTCGATCCCCGGACTTC 51241 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/68 (90%), Gaps = 3/68 (4%) Strand=Plus/Plus Query 2772 GAAGT-AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC-AACCC 2829 ||||| |||||||| |||||||||||||||||||||||||| |||||| ||||| | ||| Sbjct 25681 GAAGTTAGCTCAGT-GGGAGAGCATTAGACTGAAGATCTAAGGGTCCCGGGTTCGATCCC 25739 Query 2830 CGGGCTTC 2837 ||| |||| Sbjct 25740 CGGACTTC 25747 >seq3110 Length=204583 Score = 86.0 bits (94), Expect = 2e-13 Identities = 68/77 (88%), Gaps = 5/77 (6%) Strand=Plus/Minus Query 2763 TTTATGGCTGAAGT-AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| || Sbjct 107755 TTTATGG--GAAGTTAGCTCAGT-GGGAGAGCATTAGACTGAAGATCTAAGGGTCCCGGG 107699 Query 2822 TTC-AACCCCGGGCTTC 2837 ||| | |||||| |||| Sbjct 107698 TTCGATCCCCGGACTTC 107682 Score = 82.4 bits (90), Expect = 2e-12 Identities = 66/75 (88%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 2765 TATGGCTGAAGT-AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct 140262 TATGG--GAAGTTAGCTCAGT-GGGAGAGCATTAGACTGAAGATCTAAGGGTCCCGGGTT 140206 Query 2824 C-AACCCCGGGCTTC 2837 | | |||||| |||| Sbjct 140205 CGATCCCCGGACTTC 140191 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/68 (90%), Gaps = 3/68 (4%) Strand=Plus/Minus Query 2772 GAAGT-AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC-AACCC 2829 ||||| |||||||| |||||||||||||||||||||||||| |||||| ||||| | ||| Sbjct 180197 GAAGTTAGCTCAGT-GGGAGAGCATTAGACTGAAGATCTAAGGGTCCCGGGTTCGATCCC 180139 Query 2830 CGGGCTTC 2837 ||| |||| Sbjct 180138 CGGACTTC 180131 >seq2520 Length=92928 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/68 (90%), Gaps = 3/68 (4%) Strand=Plus/Plus Query 2772 GAAGT-AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC-AACCC 2829 ||||| |||||||| |||||||||||||||||||||||||| |||||| ||||| | ||| Sbjct 7788 GAAGTTAGCTCAGT-GGGAGAGCATTAGACTGAAGATCTAAGGGTCCCGGGTTCGATCCC 7846 Query 2830 CGGGCTTC 2837 ||| |||| Sbjct 7847 CGGACTTC 7854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848634065940