Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1673 96.9 4e-15 >seq1673 Length=160240 Score = 96.9 bits (106), Expect = 4e-15 Identities = 197/289 (68%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 94671 ACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCA 94730 ||| ||||| | |||||||| ||| | || || || || || || | || || | Sbjct 45273 ACTTATAGATACGTATATTAGTGATCCGGACGAAAAAAATCATCTTCTTAATGCTATAAA 45214 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAA 94787 ||| | || | |||| ||||||| || ||||||||| |||| ||| || |||| ||| Sbjct 45213 CACAATACCATCTATTAAAAAGAAGGCTGATTGGGCTTTGAAATGGATTAAAGATAAAAA 45154 Query 94788 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847 || | | |||||| || | |||||||||| |||||||| || || ||||| Sbjct 45153 ATC---TACTTTTGCTACCAGAGTTATCGCATTTGCTTGTGTTGAAGGAATTTTCTTTAG 45097 Query 94848 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906 ||| | || ||| | || | ||| | ||||| ||||||||||||| ||| | | | Sbjct 45096 TGGAGCATT-TGCTTCGATCTTCTGGTTAAAGAAAAGAGGTCTCATGCCTGGTTTGTCGT 45038 Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | || || || ||||| || || || || || || |||||||| Sbjct 45037 TTTCAAATGAACTTATTAGCCGAGATGAAGGTCTGCATTGCGAGTTTGC 44989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583220175885280