Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq27620 102 8e-17 >seq27620 Length=20860 Score = 102 bits (112), Expect = 8e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 || || || || | || ||||||||| ||||| |||| || || |||| || |||||| Sbjct 17966 TAGGTGTCTATCAATAAGCTGTACATCTCGGAATGTACATTTTCTATGGTGATTTGAAAT 17907 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356 ||||||||| ||| |||||| | ||||||||||| |||| || || ||| |||| Sbjct 17906 CCGTAAAAGAATCTGGCTTCTGGAATTTGAACTTCTTGAAAGAAACGCTCGACTAAATTT 17847 Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416 || || || || || || || || ||||| || || | || |||||| | |||| Sbjct 17846 TCATTGACAATACCATCAGATGCCGCAAAAAATGCTAAAACGTGTGAAATGAATTTTTTT 17787 Query 17417 TCGTCCGGT 17425 || || ||| Sbjct 17786 TCTTCGGGT 17778 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 |||||||| ||||||||||| ||||| ||||||||||| |||||||| || | Sbjct 18547 AATCTATCGGCTACAAATTCAATATACGTCTTCATTAATTCGCTATTCATTCCAATCATT 18488 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 ||| || | ||| || ||||||||| ||| ||||| ||| || || |||||| Sbjct 18487 GATACGGGTAAAGCATCGGTCAAAAATTCTTGTTCTATTTTAACAGCGTCACGAATAATT 18428 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 | || | ||| | |||| | || | |||||||||||||| |||||| ||| Sbjct 18427 TCGGTAATTTCTTCAACACTCGGTTTTTGAACCAAATGTTTAAACATCAAACATGCAAAA 18368 Query 16973 TCGCAATGTAATCCCT 16988 ||| |||||| |||| Sbjct 18367 TCGGTATGTAAACCCT 18352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517156780929360