Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq4462 154 1e-32 >seq4462 Length=45351 Score = 154 bits (170), Expect = 1e-32 Identities = 240/343 (70%), Gaps = 0/343 (0%) Strand=Plus/Plus Query 18785 CACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAA 18844 ||| || || ||||| || ||||||| ||||| ||||||||||||||||| || || || Sbjct 38497 CACAGGTGATCTTGGTCCTGTTTACGGGTTCCAATGGAGACATTTTGGAGCCGAGTACAA 38556 Query 18845 AGACTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904 ||| || | | ||| | | |||| |||||||| || |||| || ||||| || Sbjct 38557 AGATATGCACACTGATTATACAAACAAAGGCATCGATCAACTTCAAAACGTCATAGACAC 38616 Query 18905 AATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATAT 18964 ||||||| || || || || |||| || ||| |||||||||| | ||| | Sbjct 38617 GATTAAAAATAATCCCGACGATAGAAGAATAATCCTATGCGCTTGGAATCCCATTGATTT 38676 Query 18965 CCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGA 19024 || ||||| ||||||| |||||| || |||||||||| | || || || Sbjct 38677 ACCTAAAATGGCCTTACCTCCGTGTCACTGCTTGGTGCAGTTTTACGCAGTTAATGGCGA 38736 Query 19025 ATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACAT 19084 | |||| || ||| | || || |||| | |||||||| ||||| ||||| |||||||| Sbjct 38737 ACTATCGTGTCAAATGTATCAACGATCTGCCGATATGGGTCTTGGTGTACCTTTCAACAT 38796 Query 19085 TGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACA 19127 || | || | || || || || || | || ||||||||| Sbjct 38797 CGCCAGTTACTCTCTGCTCACGTATATGATTGCTCATGTTACA 38839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399211366066590