Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4462 127 1e-24 >seq4462 Length=45351 Score = 127 bits (140), Expect = 1e-24 Identities = 239/346 (69%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 101748 GATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCA 101807 |||| || |||||||||||||| | || | ||||| || || || ||||| || || | Sbjct 38843 GATTTGTAACATGAGCAATCATATACGTGAGCAGAGAGTAACTGGCGATGTTGAAAGGTA 38784 Query 101808 CTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGA 101867 | || | |||||||| || |||| |||||||| |||||| || || | |||| | Sbjct 38783 CACCAAGACCCATATCGGCAGATCGTTGATACATTTGACACGATAGTTCGCCATTAACTG 38724 Query 101868 CATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACAT 101927 | ||||| || || ||||| || || || |||||||||| | || || Sbjct 38723 CGTAAAACTGCACCAAGCAGTGACACGGAGGTAAGGCCATTTTAGGTAAATCAATGGGAT 38664 Query 101928 TCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTT-ATAGTATCAATCAAC 101986 ||||||| || | | || |||||||| || ||| || ||||| || || || || | Sbjct 38663 TCCAAGCGCATAGGATTATTCTTCTATC-GTCGGGATTATTTTTAATCGTGTCTATGACG 38605 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC-GCGCCCAACACCTTTATATTCTGC 102045 | || | ||| || | |||| | ||||||| | | | | | |||| || || || Sbjct 38604 TTTTGAAGTTGATCGATGCCTTTGTTTGTATAATCAGTGTGC-ATATCTTTGTACTCGGC 38546 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 ||| ||||| ||||| || || || || ||||| |||||||| ||| Sbjct 38545 TCCAAAATGTCTCCATTGGAACCCGTAAACAGGACCAAGATCACCT 38500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360986585979602