Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq48073 96.9 3e-15 >seq48073 Length=7537 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | ||||| ||||| || ||||||||||| || ||||| | Sbjct 6512 AATGCAAATTTTTGTAAAAACTTTGACTGGTAAAACCATTACGTTGGAGGTTGAACCGTC 6571 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | || |||||| || ||||||||| | || || || Sbjct 6572 CGATACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCA 6631 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||| | ||||| || || |||||| ||||||| | |||| || |||||| || Sbjct 6632 GCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGACGGCCGAACTTTGAGCGATTATAA 6691 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||| |||||||| || || ||||| | | ||||| || || Sbjct 6692 CATTCAGAAAGAATCTACGCTACATTTGGTGCTCAGGTTACGTGGTGG 6739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428022246824810