Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4462 215 4e-51 >seq4462 Length=45351 Score = 215 bits (238), Expect = 4e-51 Identities = 255/343 (74%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| | |||||||| || || || |||||||||||||||||||| || || || Sbjct 38501 GGTGATCTTGGTCCTGTTTACGGGTTCCAATGGAGACATTTTGGAGCCGAGTACAAAGAT 38560 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| |||| ||||| |||| | |||||| | ||||| || || | ||| Sbjct 38561 ATGCACACTGATTATACAAACAAAGGCATCGATCAACTTCAAAACGTCATAGACACGATT 38620 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 |||| || || |||| |||||||| || ||||||| ||||| | | ||| | ||| Sbjct 38621 AAAAATAATCCCGACGATAGAAGAATAATCCTATGCGCTTGGAATCCCATTGATTTACCT 38680 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATT 20456 |||||| || ||||| ||||| |||| | || ||||||| | |||| ||| | Sbjct 38681 AAAATGGCCTTACCTCCGTGTCAC-TGCTTGGTGCAGTTTTACGCAGTTAATGGCGAACT 38739 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||||||||||||||||||||||| || |||||||| || ||||| |||||||| || || Sbjct 38740 ATCGTGTCAAATGTATCAACGATCTGCCGATATGGGTCTTGGTGTACCTTTCAACATCGC 38799 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGAT 20559 ||||| | ||||| |||||||||||||| ||||||||| || Sbjct 38800 CAGTTACTCTCTGCTCACGTATATGATTGCTCATGTTACAAAT 38842 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| || | || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct 38259 TTTCCACTACTGACCACGAAACGCGTATTTTGGAAAGGCGTCGTAGAAGAATTGCTATGG 38318 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGA 20161 || |||| ||||| || ||| | | || | |||||||||||||| ||||||| Sbjct 38319 TTCATTAGGGGATCCACGAATGCGAAAGAATTATCCGAAAAAGGAGTTAAAATTTGGA 38376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398891600464390