Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4462 86.0 5e-12 >seq4462 Length=45351 Score = 86.0 bits (94), Expect = 5e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 || || ||||| |||| |||||| || || | ||| ||||||||||| || || || || Sbjct 38838 GTAACATGAGCAATCATATACGTGAGCAGAGAGTAACTGGCGATGTTGAAAGGTACACCA 38779 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 || ||||| ||||| || | || |||| || || || || || || | | ||||| Sbjct 38778 AGACCCATATCGGCAGATCGTTGATACATTTGACACGATAGTTCGCCATTAACTGCGTAA 38719 Query 21117 AACTGACACAAAAC-GTGACAAGGAGGGAGAGCCAT 21151 ||||| ||| || | |||||| ||||| | ||||| Sbjct 38718 AACTG-CACCAAGCAGTGACACGGAGGTAAGGCCAT 38684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427462657020960