Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq37708 178 3e-39 seq48073 168 2e-36 seq15454 158 3e-33 seq27620 152 1e-31 seq39349 150 4e-31 seq8389 111 4e-19 seq28516 98.7 2e-15 seq47220 93.3 1e-13 >seq37708 Length=8338 Score = 178 bits (196), Expect = 3e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || | || | || |||||||| || || |||||||| Sbjct 4868 ATACCGCCTCTCAGTCGGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTATAGTCC 4927 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||||||||| |||||||||||||| || || || | || ||||| ||| Sbjct 4928 GAAAGGGTTCTACCGTCTTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCGGGA 4987 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| || || || ||||| || ||||| | || ||||| || ||| Sbjct 4988 GGGATGCCTTCTTTATCTTGGATTTTCGCTTTGACGTTTTCGATAGTGTCGCTCGGCTCT 5047 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || || |||||||| | ||||| ||||| ||||||||||| Sbjct 5048 ACTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTAACAAAGATCTGCATTTT 5100 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | | ||| |||| ||| | || ||||||||||| || || ||||| Sbjct 3728 ATACCACCTCTCAATCGAAGAACTAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCC 3787 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| |||||||| || || || || || | |||||||| || Sbjct 3788 GAGAGAGTTCTTCCATCTTCGAGTTGTTTACCGGCGAAGATGAGACGTTGTTGATCGGGT 3847 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || || || || ||||| || ||||| | ||||||||||| || Sbjct 3848 GGGATTCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTTTCGATCGTATCGCTAGGCTCG 3907 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || ||||| || | || ||||| || |||||||| Sbjct 3908 ACTTCGAGTGTGATTGTTTTACCGGTTAACGTCTTTACGAAAATCTGCAT 3957 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| || || |||||||| |||||||||||||| || ||||| ||||||||||| ||||| Sbjct 3982 ATGCAACGTCGATTCTTTTTGAATATTATAGTCCGAGAGAGTCCTACCGTCTTCGAGTTG 4041 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 ||| || || ||||||| | || || || || || ||||| |||||||| ||||| || Sbjct 4042 TTTACCGGCGAAAATTAAACGTTGCTGGTCGGGGGGAATTCCCTCTTTATCTTGAATTTT 4101 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || || |||||||| | || ||||| || || || || ||||| || || || || || Sbjct 4102 GGCCTTGACATTTTCGATCGTGTCGCTTGGCTCGACTTCGAGTGTGATGGTTTTTCCTGT 4161 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 | |||||||| || || ||||| Sbjct 4162 CAAGGTTTTTACGAAAATTTGCAT 4185 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | |||||| || || ||||| || || || || || || || ||||||||||| Sbjct 4201 AAGCACCAAATGTAAAGTCGACTCTTTTTGGATGTTGTAATCGGAGAGCGTTCTACCGTC 4260 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| | |||||| || || ||||| || | || || || ||||| ||||| |||||||| Sbjct 4261 TTCCAATTGTTTACCGGCGAAAATGAGACGTTGCTGGTCGGGAGGAATTCCCTCTTTATC 4320 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| || || ||||||||||| | ||| |||||||| || || || || ||||| || Sbjct 4321 TTGAATTTTAGCCTTTACATTTTCGATGGTGTCGCTAGGCTCAACTTCGAGGGTAATCGT 4380 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | ||||| || || || ||||| Sbjct 4381 TTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 4413 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || ||||| || || ||||||||||| || || || |||||||| ||||| || || Sbjct 3299 TGCAACGTAGACTCCTTTTGAATATTATAATCCGAAAGCGTTCTACCATCTTCGAGCTGC 3358 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| || |||||||| | || ||||| ||||| || |||||||| || || || || Sbjct 3359 TTTCCGGCGAAAATTAGACGTTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATTTTC 3418 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || || || ||||| | ||||||||||| || || || || || || || ||||| || Sbjct 3419 GCCTTAACGTTTTCGATCGTATCGCTAGGCTCGACTTCGAGGGTGATGGTTTTACCTGTC 3478 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | || || || || |||||||| Sbjct 3479 AACGTCTTGACGAAGATCTGCAT 3501 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | || || | || | || |||||||| || || || || || Sbjct 4412 ATACCGCCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCC 4471 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||| ||||| || ||||| || || || || || | || ||||| || Sbjct 4472 GAAAGGGTTCTACCATCTTCGAGCTGTTTACCGGCGAAGATGAGACGTTGCTGATCGGGC 4531 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| ||||| || || || |||||||| | || || ||||| || Sbjct 4532 GGAATGCCTTCCTTATCTTGAATTTTCGCCTTGACATTTTCAATCGTGTCACTAGGCTCG 4591 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| |||||||||||||| | || || || ||||||||||| Sbjct 4592 ACTTCCAATGTGATAGTCTTACCAGTCAAGGTCTTGACGAATATCTGCAT 4641 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | | ||||| | ||| || ||||||||||| || |||||||| || Sbjct 4640 ATACCACCTCTCAAACGGAGTACCAAATGCAACGTAGATTCTTTTTGGATATTATAATCG 4699 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || || || ||||| || ||||| || ||||| || | | ||||| || ||| Sbjct 4700 GACAAGGTCCTTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAAACGTTGTTGGTCGGGA 4759 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || || || || || || |||||||| | || |||||||| || Sbjct 4760 GGGATGCCTTCTTTGTCTTGGATTTTAGCCTTCACATTTTCGATAGTGTCGCTAGGCTCG 4819 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || || || || | |||||||| || || ||||| Sbjct 4820 ACTTCGAGGGTAATCGTTTTGCCGGTCAAGGTTTTTACGAAAATTTGCAT 4869 >seq48073 Length=7537 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || ||| || || | ||||| ||||||||||||||||| ||||| || Sbjct 6742 ATTCCACCACGTAACCTGAGCACCAAATGTAGCGTAGATTCTTTCTGAATGTTATAATCG 6683 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| |||||||| | ||||||||| || || || | || || || || || Sbjct 6682 CTCAAAGTTCGGCCGTCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCGGGT 6623 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| || ||||| |||||||| | ||||||| ||||| Sbjct 6622 GGGATACCTTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTATCGGACGGTTCA 6563 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| | ||||| || |||||||| | ||||||||||| || |||||| Sbjct 6562 ACCTCCAACGTAATGGTTTTACCAGTCAAAGTTTTTACAAAAATTTGCATT 6512 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| |||||||| ||||| | ||| | |||||||| | |||||||| Sbjct 5569 GTGGATTCTTTTTGAATATTGTAGTCGCTCAAAGTACGTCCGTCTTCCAACTGTTTTCCG 5510 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||||| || ||| || || || || || ||||||||||| ||||| || ||||| Sbjct 5509 GCGAAAATTAACCGCTGCTGGTCGGGTGGGATACCTTCTTTATCTTGAATTTTAGCTTTG 5450 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||| ||| ||||| || |||| || || ||||| |||||||| ||| Sbjct 5449 ACATTTTCAATGGTGTCGGACGGTTCGACTTCTAAGGTGATGGTCTTTCCAGTAAGAGTT 5390 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| |||||||| ||| Sbjct 5389 TTAACAAAAATCTGCATCTTG 5369 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| ||| | || ||||||||||| ||||| ||||| | || | ||||||||| Sbjct 6037 ACTAAATGAAGAGTGGATTCTTTCTGGATATTGTAGTCGCTCAAGGTACGTCCGTCTTCT 5978 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | |||||| ||||| ||||||| | || || || || || || ||||||||||| ||| Sbjct 5977 AATTGTTTGCCAGCGAAAATTAATCGTTGCTGGTCGGGTGGGATACCTTCTTTATCTTGA 5918 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| || ||||| | |||||| ||||||||||| || ||||||||||| Sbjct 5917 ATTTTCGCTTTCACGTTTTCGATGGTATCTGATGGTTCTACCTCCAGCGTAATAGTCTTT 5858 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | ||||| || || || |||||| Sbjct 5857 CCGGTCAAAGTTTTAACGAAAATTTGCATT 5828 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| ||||| || || || ||||| | ||||||||| | ||||| ||| Sbjct 6937 GTCGACTCTTTTTGAATGTTGTAATCGCTCAGAGTACGACCGTCTTCCAACTGTTTACCA 6878 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| || ||||| || |||||||||||||||||||| || || || Sbjct 6877 GCAAAGATCAATCGCTGCTGGTCAGGCGGGATTCCTTCTTTATCCTGAATTTTGGCCTTC 6818 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | |||||| ||||||||||| || ||||| ||||| || || | ||| Sbjct 6817 ACGTTTTCGATAGTATCGGACGGTTCTACCTCCAGCGTAATCGTCTTTCCGGTCAAAGTT 6758 Query 104543 TTTACAAATATCTGCATT 104560 || || || || |||||| Sbjct 6757 TTAACGAAAATTTGCATT 6740 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | | |||| || | || || ||||| ||||| || || || Sbjct 6514 ATTCCACCTCGGAGACGCAAGACTAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAATCG 6455 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| |||||||| | |||||||| || ||||||| || ||| || || || Sbjct 6454 CTCAAAGTTCGGCCGTCTTCCAACTGTTTTCCGGCGAAAATTAACCGCTGCTGGTCGGGT 6395 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||||||||| || ||||| || ||||| | ||||| |||||| Sbjct 6394 GGAATGCCTTCTTTATCCTGAATTTTAGCTTTGACGTTTTCAATCGTATCAGACGGTTCT 6335 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || | ||||| ||||| || ||||| Sbjct 6334 ACTTCCAGGGTAATGGTTTTACCGGTTAACGTTTTAACAAAAATTTGCAT 6285 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || ||| || || | ||| | ||||||||||||||||| ||||| || Sbjct 5830 ATTCCACCACGTAACCTGAGCACCAAATGAAGCGTAGATTCTTTCTGAATGTTATAATCG 5771 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| |||||||| | ||| || || || || || | || ||||| || || Sbjct 5770 CTCAAAGTTCGGCCGTCTTCCAATTGCTTCCCGGCGAAGATCAATCTTTGTTGGTCGGGT 5711 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||||||||| ||||| || || || | ||||||| || ||| Sbjct 5710 GGGATGCCTTCCTTGTCCTGAATCTTAGCTTTAACGTTCTCGATGGTATCGGACGGCTCT 5651 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || ||||| || | || || || || || ||||| Sbjct 5650 ACTTCCAACGTAATGGTTTTACCGGTTAACGTCTTGACGAAAATTTGCAT 5601 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||||||||| || ||||| | |||||||| | ||||| || Sbjct 6253 GTAGATTCTTTTTGAATATTATAATCGCTGAGAGTACGGCCGTCTTCCAACTGTTTACCG 6194 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | ||||| || || || || || ||||||||||| || ||||| ||||| Sbjct 6193 GCGAAGATCAATCTCTGCTGGTCGGGTGGGATACCTTCTTTATCTTGTATCTTGGCTTTG 6134 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | ||| ||| ||||| || || | || || || || || || || ||| Sbjct 6133 ACGTTTTCGATGGTGTCGGACGGTTCCACTTCCAAGGTGATGGTTTTTCCGGTGAGCGTT 6074 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 6073 TTAACAAAAATTTGCAT 6057 >seq15454 Length=877 Score = 158 bits (174), Expect = 3e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||||||||| || ||||||| |||||||| ||||| | ||| ||||| || || | Sbjct 224 CTTTCTGAATATTGTAATCAGATAACGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 165 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 ||| | || || || ||||| || ||||| ||||| ||||| || ||||| ||||||| Sbjct 164 TTAAACGTTGCTGGTCGGGAGGGATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTT 105 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| ||||| |||||| || || || || ||||| ||||| ||||| ||||| || | Sbjct 104 CTATCGTATCCGAAGGTTCGACTTCGAGAGTGATAGTTTTACCCGTAAGGGTTTTCACGA 45 Query 104550 ATATCTGCAT 104559 | |||||||| Sbjct 44 AAATCTGCAT 35 >seq27620 Length=20860 Score = 152 bits (168), Expect = 1e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 268807 AGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTT 268866 ||||||| |||| | ||||| ||||||| || ||| || || | || | || ||||| Sbjct 17760 AGATTGGCAAAAACTGAAACCCGAAGAAAAAAAATTCATTTCACACGTTTTAGCATTTTT 17819 Query 268867 TGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACA 268926 ||| | ||||||||| || || |||||| |||| ||| |||| |||||| || || Sbjct 17820 TGCGGCATCTGATGGTATTGTCAATGAAAATTTAGTCGAGCGTTTCTTTCAAGAAGTTCA 17879 Query 268927 GATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGA 268986 ||||| |||||||||| ||||||||||| || || | ||||||||| | ||||| || Sbjct 17880 AATTCCAGAAGCCAGATTCTTTTACGGATTTCAAATCACCATAGAAAATGTACATTCCGA 17939 Query 268987 GATGTACAGTCTATTAATAGATACTTA 269013 ||||||||| |||| ||||| || || Sbjct 17940 GATGTACAGCTTATTGATAGACACCTA 17966 Score = 104 bits (114), Expect = 5e-17 Identities = 141/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 269069 TGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT---AGCGCGCCTTAC 269125 ||||| | || ||| | || ||||| ||||||||||| ||| ||||| ||| Sbjct 18085 TGTGTAAAGAAGAAAGCGGACTGGGCGTTGAAATGGATAGCTGATCAAAGCGCTACTTTT 18144 Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 | ||| || | |||| ||||| || || |||||||| |||||||| || ||||| Sbjct 18145 GCTGAACGGGTCATTGCGTTTGCTGCCGTCGAAGGTATTTTCTTTTCCGGAAGCTTTGCT 18204 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 || || || ||| | || || |||||||| ||||| ||| | |||||| ||| ||| || Sbjct 18205 GCGATATTCTGGCTTAAAAAGAGAGGCCTAATGCCTGGACTGACTTTCAGTAATGAACTG 18264 Query 269246 ATAAGCAGGGACGAAG 269261 ||| || ||||||| Sbjct 18265 ATATCAAGAGACGAAG 18280 >seq39349 Length=17693 Score = 150 bits (166), Expect = 4e-31 Identities = 173/229 (76%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 268789 TCTGTCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATC 268848 ||||| | | || || | ||||||| |||| | ||||| |||||||||| ||| || || Sbjct 11113 TCTGT-TCAGGATTTCAGAGATTGGGAAAAACTGAAACCCGAAGAAAGAAAATTCATTTC 11171 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 || | | || |||||||||| ||| ||||| || || ||||| | || || | Sbjct 11172 ACATGTCTTAGCATTTTTTGCAGCCTCTGACGGTATTGTCAATGAAAACTTGGTCGA-AC 11230 Query 268909 GTTCTGTC-AAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTA 268967 ||| | || ||||||| || || || |||||||||| ||||||||| || || ||| | | Sbjct 11231 GTTTTTTCCAAGAGGTGCAAATCCCCGAAGCCAGATTTTTTTACGGGTTTCAAATAACAA 11290 Query 268968 TAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 | |||||| | |||||||||||||||||| | || || || |||||||| Sbjct 11291 TTGAAAATGTACATTCAGAGATGTACAGTTTGTTGATTGACACTTATAT 11339 >seq8389 Length=28122 Score = 111 bits (122), Expect = 4e-19 Identities = 108/138 (78%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 104322 CTTTATTTAT-TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATA 104380 |||| |||| ||| ||||||| | | ||||| ||| || || |||||||| ||||| Sbjct 12968 CTTTTTTTAGCTCCTCCTCTTAATCGTAATACTAAATGCAACGTCGATTCTTTTTGAATG 12909 Query 104381 TTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGT 104440 || || ||||| |||||||| || ||||| |||||||| ||||| ||||| | | ||| Sbjct 12908 TTGTAATCAGAAAGAGTTCTTCCATCTTCAAGTTGTTTACCAGCGAAAATCAAACGTTGT 12849 Query 104441 TGATCAGGAGGTATTCCT 104458 ||||||||||| || ||| Sbjct 12848 TGATCAGGAGGAATGCCT 12831 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||||||| || || || || |||||||||||||| | |||| |||||||| ||||| Sbjct 12743 CCTTCTTTGTCTTGTATTTTGGCTTTTACATTTTCAATACTATCACTAGGTTCGACCTCA 12684 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || |||||||| || || | ||||| || || || |||||||| Sbjct 12683 AGGGTGATAGTCTTGCCCGTTAAAGTTTTAACGAAAATTTGCATTTT 12637 >seq28516 Length=38763 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||||||| || |||||||| ||||| |||||||| | |||||||||||||| ||||| Sbjct 20348 CCTTCTTTGTCTTGAATCTTAGCTTTCACATTTTCGATAGTATCGCTAGGTTCGACCTCA 20289 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || |||||||| || | ||||| || || || ||||| Sbjct 20288 AGGGTGATGGTCTTACCCGTCAAAGTTTTGACGAAAATTTGCAT 20245 >seq47220 Length=26836 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 238578 ACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCAT 238637 ||||||||| | ||||| | || |||| ||||||||| |||||||||||| Sbjct 2564 ACTCACGATGATTTGTGGAACGCAGCTCAGAAACAAATGGTTGTGGAAGGCAAAATGCAC 2505 Query 238638 AGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCCAAAGGAA 238697 | || || ||||||||||||| ||||| ||| | |||||||| | |||| | ||| Sbjct 2504 GGGTTTTTGAGAATGTATTGGGCCAAAAAAATATTGGAATGGACCAAGAGTCCAGAAGAA 2445 Query 238698 GCTCTTAGATA-TAGTATTTATCTGAACGATAAATACGAACTCGACGGTACGGATCCTAA 238756 ||| ||||| | | |||||||| ||||| |||||| | || |||| || || || Sbjct 2444 GCT-TTAGAAATTTCGATTTATCTAAACGACAAATACAGTATGGATGGTAGAGACCCCAA 2386 Query 238757 CGGATACGTAGGT 238769 || || || ||| Sbjct 2385 TGGTTATGTTGGT 2373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150511757746216