Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq59737 161 7e-35 seq37708 143 2e-29 seq48073 125 5e-24 seq20513 120 2e-22 seq15454 113 3e-20 >seq59737 Length=6840 Score = 161 bits (178), Expect = 7e-35 Identities = 208/284 (73%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || ||||| || ||||| |||||||| || ||||||||||| || ||| ||| |||| Sbjct 6060 CCTACGAAGTACTTCGGTTGCGAACTCGGAGCTCAGACGCAATTCGATTTCAAGCACGAT 6119 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||||||| || || || ||||| | | |||||| |||| || | | ||||| || Sbjct 6120 CGCTTCATAGTAAATGGTTCGCACGAGGCGGCCAAGTTGCAAGATCTGTTGGACGGATTC 6179 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGT---G 6497 |||||||| ||||| ||||| | ||| |||||||| ||||| ||||| || || || Sbjct 6180 ATTCGCAAATTTGTACTGTGCCCGGACTGCGATAATCCGGAAACCGATCTGATCGTCAGC 6239 Query 6498 TCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTG 6557 ||| || || || |||||| | ||| || ||||||||||| | || ||| ||| Sbjct 6240 GCTA--AAAAGCAA-ACCATCACGGTGGGATGTAAAGCGTGCGGACATCACGGCCCTCTG 6296 Query 6558 GATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601 || | || ||||| ||||| ||||| |||||||||| || Sbjct 6297 GAGTACAACCATAAACTGAACACGTTCATTTTGAAGAATCCACC 6340 Score = 89.7 bits (98), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCC---GCGCATCTGC 6230 ||||| || || || || || || |||||||||||||| ||||| || ||| | Sbjct 5818 AACGTGAACCGAAACGTCAGCGATGCTTTCTACCGCTACAAGATGCCAAAGCTCAT---C 5874 Query 6231 GCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTC 6290 || || ||||| || || || ||||| ||||||||||| || ||||||||| || || Sbjct 5875 GCAAAAGTCGAAGGAAAAGGGAACGGCATTAAAACCGTTATCGTCAACATGATCGAGGTT 5934 Query 6291 GCTAAGGCGCTCGGACGCCCT 6311 ||||| || ||||||| ||| Sbjct 5935 GCTAAAGCTATCGGACGTCCT 5955 >seq37708 Length=8338 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||||||| | |||||||| | || || ||||| ||||| ||||| | Sbjct 4641 TACCACCTCTCAAACGGAGTACCAAATGCAACGTAGATTCTTTTTGGATATTATAATCGG 4700 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | | || || | ||||| |||||||| || | |||||||| |||| | Sbjct 4701 ACAAGGTCCTTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAAACGTTGTTGGTCGGGAG 4760 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||||||| ||||| ||||||||| | || ||| || | | || | Sbjct 4761 GGATGCCTTCTTTGTCTTGGATTTTAGCCTTCACATTTTCGATAGTGTCGCTAGGCTCGA 4820 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||| ||||| || ||||||||||| ||||| || ||||| Sbjct 4821 CTTCGAGGGTAATCGTTTTGCCGGTCAAGGTTTTTACGAAAATTTGCAT 4869 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| || | || ||||| |||||| || || || || ||||| || | Sbjct 3729 TACCACCTCTCAATCGAAGAACTAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCCG 3788 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | |||||| ||||| || || || ||||||||||||| | Sbjct 3789 AGAGAGTTCTTCCATCTTCGAGTTGTTTACCGGCGAAGATGAGACGTTGTTGATCGGGTG 3848 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||||| ||||| ||||| || | || ||||| | | || | Sbjct 3849 GGATTCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTTTCGATCGTATCGCTAGGCTCGA 3908 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||| || |||||||| || || || || ||||| |||||||| Sbjct 3909 CTTCGAGTGTGATTGTTTTACCGGTTAACGTCTTTACGAAAATCTGCAT 3957 Score = 125 bits (138), Expect = 5e-24 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || ||||| || | ||||||||| | ||| ||| ||||| || |||||||| | Sbjct 4185 TACCTCCCCTCAATCGAAGCACCAAATGTAAAGTCGACTCTTTTTGGATGTTGTAATCGG 4244 Query 38149 ACAAAACACGTTC----GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | ||||| ||| || |||||||| ||||| || || || ||||| || ||| Sbjct 4245 AGAG----CGTTCTACCGTCTTCCAATTGTTTACCGGCGAAAATGAGACGTTGCTGGTCG 4300 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | || ||||| || |||||| ||| ||||| | || || || | | Sbjct 4301 GGAGGAATTCCCTCTTTATCTTGAATTTTAGCCTTTACATTTTCGATGGTGTCGCTAGGC 4360 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| | ||||| ||||| || ||||||||||||||||| || ||||| Sbjct 4361 TCAACTTCGAGGGTAATCGTTTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 4413 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || || | |||||||| || ||| ||||||||||| || ||||| | Sbjct 3501 TACCACCTCTTAATCGGAGAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAATCGG 3560 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | |||||| ||||| || || || ||||| || |||| | Sbjct 3561 AAAGGGTACGGCCATCTTCGAGTTGTTTGCCGGCGAAAATAAGACGTTGCTGGTCGGGAG 3620 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||| || |||||| ||| || || | || || || | || | Sbjct 3621 GAATTCCCTCTTTATCTTGAATTTTGGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTA 3680 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| || || || || || ||||||||||||||||| || ||||| Sbjct 3681 CTTCTAACGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 3729 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||||||| ||||| |||||||| | || || ||||||||||| || || | Sbjct 3957 TACCGCCTCTCAATCGCAAAACCAAATGCAACGTCGATTCTTTTTGAATATTATAGTCCG 4016 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | |||| || | |||||| ||||| || |||| ||||| || |||| || Sbjct 4017 AGAGAGTCCTACCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGCTGGTCGGGGG 4076 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||| || |||||| ||| ||||| | || || || | || | Sbjct 4077 GAATTCCCTCTTTATCTTGAATTTTGGCCTTGACATTTTCGATCGTGTCGCTTGGCTCGA 4136 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||| || ||||| || ||||||||||| ||||| || ||||| Sbjct 4137 CTTCGAGTGTGATGGTTTTTCCTGTCAAGGTTTTTACGAAAATTTGCAT 4185 Score = 111 bits (122), Expect = 1e-19 Identities = 166/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 ||||||||| | | ||||| ||||| || | || ||||||||||||||| ||||| Sbjct 3271 ATTACCACCACGAAGTCGCAATACCAAGTGCAACGTAGACTCCTTTTGAATATTATAATC 3330 Query 38147 AGACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGAT 38202 || | ||||| || || | || |||||||| || ||||| ||||| |||| Sbjct 3331 CGAAAG----CGTTCTACCATCTTCGAGCTGCTTTCCGGCGAAAATTAGACGTTGCTGAT 3386 Query 38203 CGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC 38262 | | |||| ||||||||||| ||||| ||| || || | || ||||| | | Sbjct 3387 CCGGAGGGATACCTTCTTTGTCTTGGATTTTCGCCTTAACGTTTTCGATCGTATCGCTAG 3446 Query 38263 TTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| | || || |||||||| ||||| || || ||||| |||||||| Sbjct 3447 GCTCGACTTCGAGGGTGATGGTTTTACCTGTCAACGTCTTGACGAAGATCTGCAT 3501 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| || || | ||||| ||||| || || ||||| || |||||||| | Sbjct 4413 TACCGCCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCCG 4472 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | || || | ||||| ||||| || || || ||||| ||||||| | Sbjct 4473 AAAGGGTTCTACCATCTTCGAGCTGTTTACCGGCGAAGATGAGACGTTGCTGATCGGGCG 4532 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| || || |||||| ||| ||||| | | || || | | || | Sbjct 4533 GAATGCCTTCCTTATCTTGAATTTTCGCCTTGACATTTTCAATCGTGTCACTAGGCTCGA 4592 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| ||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct 4593 CTTCCAATGTGATAGTCTTACCAGTCAAGGTCTTGACGAATATCTGCAT 4641 >seq48073 Length=7537 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| || || |||||||||||| || || || |||||||| || Sbjct 6057 TACCACCACGGAGACGTAAAACTAAATGAAGAGTGGATTCTTTCTGGATATTGTAGTCGC 5998 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| |||| |||| ||||||||||| || || || |||| ||||| || |||| | Sbjct 5997 TCAAGGTACGTCCGTCTTCTAATTGTTTGCCAGCGAAAATTAATCGTTGCTGGTCGGGTG 5938 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || |||||| ||||| || | || |||||| ||| | Sbjct 5937 GGATACCTTCTTTATCTTGAATTTTCGCTTTCACGTTTTCGATGGTATCTGATGGTTCTA 5878 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | |||||||| || || ||||| ||||| ||||| || ||||| Sbjct 5877 CCTCCAGCGTAATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 5829 Score = 122 bits (134), Expect = 6e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | |||||| ||||||||||| ||| || |||||||||||||| || Sbjct 5601 TACCACCACGGAGACGCAAGACCAAATGAAGGGTGGATTCTTTTTGAATATTGTAGTCGC 5542 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| |||| |||| || || ||||||||||| || |||| || || || |||| | Sbjct 5541 TCAAAGTACGTCCGTCTTCCAACTGTTTTCCGGCGAAAATTAACCGCTGCTGGTCGGGTG 5482 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || |||||| || ||||| | | || || ||| | Sbjct 5481 GGATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTGTCGGACGGTTCGA 5422 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||||| || || || || || || | ||||| || || |||||||| || Sbjct 5421 CTTCTAAGGTGATGGTCTTTCCAGTAAGAGTTTTAACAAAAATCTGCATCTT 5370 Score = 113 bits (124), Expect = 3e-20 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||| | |||||| || || ||||| || ||| |||||||| ||||||| Sbjct 6515 CATT-CCACCTCGGAGACGCAAGACTAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAAT 6457 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | |||| || |||| || || ||||||||||| || |||| || || || |||| Sbjct 6456 CGCTCAAAGTTCGGCCGTCTTCCAACTGTTTTCCGGCGAAAATTAACCGCTGCTGGTCGG 6397 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||||||| ||| |||||| || || || | | ||||| || Sbjct 6396 GTGGAATGCCTTCTTTATCCTGAATTTTAGCTTTGACGTTTTCAATCGTATCAGACGGTT 6337 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||||| |||||||| || || ||||| || || || ||||| Sbjct 6336 CTACTTCCAGGGTAATGGTTTTACCGGTTAACGTTTTAACAAAAATTTGCAT 6285 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| || ||||||||||| || ||| |||||||| |||||||| || | ||| | Sbjct 6956 ACGTAAAACCAAATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGCTCAGAGTACGACC 6897 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || || ||||| || ||||| || | || || || || | |||| |||||||| Sbjct 6896 GTCTTCCAACTGTTTACCAGCAAAGATCAATCGCTGCTGGTCAGGCGGGATTCCTTCTTT 6837 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| |||||| |||||| || | || |||||| ||| || || | ||||| Sbjct 6836 ATCCTGAATTTTGGCCTTCACGTTTTCGATAGTATCGGACGGTTCTACCTCCAGCGTAAT 6777 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| ||||| ||||| || ||||| Sbjct 6776 CGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 6741 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||||||| || || || || ||||| || ||||| |||| || |||| || Sbjct 6722 CACCAAATGTAGCGTAGATTCTTTCTGAATGTTATAATCGCTCAAAGTTCGGCCGTCTTC 6663 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 |||||||||||||| || || | | ||| || |||| |||| ||||||||||| Sbjct 6662 CAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCGGGTGGGATACCTTCTTTGTCTTG 6603 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 |||||| |||||||| | | ||||| |||||| || || ||||| ||||| Sbjct 6602 AATTTTGGCTTTCACATTTTCAATGGTATCGGACGGTTCAACCTCCAACGTAATGGTTTT 6543 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| ||||| ||||| || || || ||||| Sbjct 6542 ACCAGTCAAAGTTTTTACAAAAATTTGCAT 6513 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 |||||||||||| || || || ||||| || ||||| |||| || |||| || Sbjct 5810 CACCAAATGAAGCGTAGATTCTTTCTGAATGTTATAATCGCTCAAAGTTCGGCCGTCTTC 5751 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 ||||| || ||||| || || | | |||||| |||| |||| |||||| |||||| Sbjct 5750 CAATTGCTTCCCGGCGAAGATCAATCTTTGTTGGTCGGGTGGGATGCCTTCCTTGTCCTG 5691 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 ||| || || || |||| || ||||| || ||||| || ||||| ||||| Sbjct 5690 AATCTTAGCTTTAACGTTCTCGATGGTATCGGACGGCTCTACTTCCAACGTAATGGTTTT 5631 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| || || || || ||||| || ||||| Sbjct 5630 ACCGGTTAACGTCTTGACGAAAATTTGCAT 5601 >seq20513 Length=9887 Score = 120 bits (132), Expect = 2e-22 Identities = 74/78 (95%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 4916 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGGTCTCGT 4975 Query 20007 GGTAATATT-TAGCCTTA 20023 ||| ||||| |||||||| Sbjct 4976 GGTCATATTGTAGCCTTA 4993 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 7/97 (7%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCT-C 25954 |||||||||||||||||||||||||||| | ||| |||| | |||| | Sbjct 2124 AAGCCCGTTCCCTTGGCTGTGGTTTCGCGATGGCGTAAGCAGGGACAATTGAGAATCAAC 2183 Query 25955 GTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||| |||||||||||||||||||||||||||| Sbjct 2184 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 2220 >seq15454 Length=877 Score = 113 bits (124), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGC 38182 ||||| ||||||||||||||||| || ||||| || || ||||| |||||||| Sbjct 225 CCTTTCTGAATATTGTAATCAGATAA----CGTTCTACCATCTTCCAATTGCTTTCCGGC 170 Query 38183 AAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCAC 38242 || |||| ||||| || |||| |||| ||||| || || |||||| || || Sbjct 169 GAAGATTAAACGTTGCTGGTCGGGAGGGATACCTTCCTTATCTTGAATTTTAGCTTTGAC 110 Query 38243 ATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTT 38302 ||| | | ||||| | ||| ||||| | || |||||||||||||| | |||||| Sbjct 109 ATTTTCTATCGTATCCGAAGGTTCGACTTCGAGAGTGATAGTTTTACCCGTAAGGGTTTT 50 Query 38303 CACGAATATCTGCAT 38317 |||||| |||||||| Sbjct 49 CACGAAAATCTGCAT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334701853478762