Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq15381 77.0 8e-11 >seq15381 Length=12300 Score = 77.0 bits (84), Expect = 8e-11 Identities = 99/137 (72%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402 || || ||||||| | |||| ||||| || ||||||||||||||||| ||||| || Sbjct 7908 CGTGTATTTCCAAAAGTCACCAAGTGTACATTCCACAAATACGGTCCTTCCGGCTCGGTG 7849 Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462 | || | ||| || || ||| | | || |||| | || ||||| || |||||| | Sbjct 7848 CAGAAGTTCGACGGTCTGTGCGTGTTGCCTTTGAACATCGTTAACGAAAAAATCTACGTA 7789 Query 3463 TTCCTCTGGTTCTGGTT 3479 || | ||||| ||||| Sbjct 7788 TTTTTGTGGTTTTGGTT 7772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12471796077000