Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq27620 84.2 4e-11 >seq27620 Length=20860 Score = 84.2 bits (92), Expect = 4e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| || || ||||| || | |||||||| |||||||||||| | || Sbjct 18058 CTGTTCAATGCCATTGAAACAATGCCTTGTGTAAAGAAGAAAGCGGACTGGGCGTTGAAA 18117 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 ||||| | || ||| || || | || || | | || ||| | |||||||| Sbjct 18118 TGGATAGCTGATCAAAGCGCTACTTTTGCTGAACGGGTCATTGCGTTTGCTGCCGTCGAA 18177 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGAT 42787 || || ||||| || || ||| || | || |||||||| || ||| ||| | || Sbjct 18178 GGTATTTTCTTTTCCGGAAGCTTTGCTGCGATATTCTGGCTTAAAAAGAGAGGCCT-AAT 18236 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||| ||||| || ||| || ||||| || Sbjct 18237 GCCTGGACTGACTTTCAGTAATGAACTGAT 18266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943629741567520