Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4462 123 2e-23 >seq4462 Length=45351 Score = 123 bits (136), Expect = 2e-23 Identities = 230/338 (68%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 ||||||||||||| |||||| || | || || || ||||| ||||| ||||| || || Sbjct 38838 GTAACATGAGCAATCATATACGTGAGCAGAGAGTAACTGGCGATGTTGAAAGGTACACCA 38779 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 | |||||| || | || | ||||||| ||||| || || || || | | || | ||| Sbjct 38778 AGACCCATATCGGCAGATCGTTGATACATTTGACACGATAGTTCGCCATTAACTGCGTAA 38719 Query 20363 AATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCAC 20422 || || || ||||||| || || | ||||| | || || || ||||| Sbjct 38718 AACTGCACCAAGCAGTGACACGGAGGTAAGGCCATTTTAGGTAAATCAATGGGATTCCAA 38659 Query 20423 GCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGAC 20482 || || | || ||||||||||||| ||||||||||| || || | | || Sbjct 38658 GCGCATAGGATTATTCTTCTATCGTCGGGATTATTTTTAATCGTGTCTATGACGTTTTGA 38599 Query 20483 AATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAG 20542 | ||| || | || | | |||||| |||| | | || |||| | || ||||| Sbjct 38598 AGTTGATCGATGCCTTTGTTTGTATAATCAGTGTGCATATCTTTGTACTCGGCTCCAAAA 38539 Query 20543 TGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 || ||||| ||||| ||||||||||| || | ||| || Sbjct 38538 TGTCTCCATTGGAACCCGTAAACAGGACCAAGATCACC 38501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441041207649680