Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq20513 102 6e-17 >seq20513 Length=9887 Score = 102 bits (112), Expect = 6e-17 Identities = 80/92 (87%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| ||||||||||| Sbjct 8653 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACAATCTAAGGAAC 8712 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATC 114422 || ||||||| || |||||| |||| ||| || Sbjct 8713 CATAACTGATTTAATGAGCCTTTCGCGGTTTC 8744 Score = 102 bits (112), Expect = 6e-17 Identities = 80/92 (87%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| ||||||||||| Sbjct 8653 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACAATCTAAGGAAC 8712 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATC 115619 || ||||||| || |||||| |||| ||| || Sbjct 8713 CATAACTGATTTAATGAGCCTTTCGCGGTTTC 8744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396771554521804