Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq47332 113 5e-20 >seq47332 Length=57819 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 |||||||| ||||| ||| |||||||| || | ||||| ||||||||| | |||| Sbjct 7646 TACACTCCATATCAGTGTGAAATATCTCAAGGTCGTCTGGAAAATTTATTCAACTTCCAA 7587 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | |||| |||||| || |||||| |||| |||||||||||||| || |||| | Sbjct 7586 ACCATGATCATAGAACTGACCGGATTAGACGTAGCCAACGCATCTCTATTGGACGAAGGA 7527 Query 153408 ACTGCAGCAGCAGAAGCAAT 153427 || || ||||| |||||||| Sbjct 7526 ACAGCCGCAGCTGAAGCAAT 7507 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015 ||||||||| | || || ||||| | || || || |||||||| ||| ||| Sbjct 5169 CAGGTATATTTAGACGGGGCAAACATGAACGCTCAAGTAGGACTTTGTCGACCTGCTGAC 5110 Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075 ||||| | ||||| | |||| |||| | ||||| || || ||||||||||| |||||| Sbjct 5109 TATGGGTCTGATGTTTCTCATTTAAATCTTCATAAGACTTTTTGTATTCCACACGGAGGT 5050 Query 155076 GGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || |||||||| || || ||| ||| ||| Sbjct 5049 GGTGGTCCTGGAGTCGGACCTGTAGCTGT 5021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578777651903680