Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq13882 109 7e-19 >seq13882 Length=28581 Score = 109 bits (120), Expect = 7e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 197085 ATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAA 197144 || |||| | ||||| ||||| |||| || || |||||||| || || ||| || | Sbjct 11757 ATCGTAAGAAGCGAGCAAGAAGCCGCCATAAGTCCCCGTTCTTTTACCTTTACCGCTGTA 11816 Query 197145 GCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAG 197204 || ||||||||||| | ||||| ||||||| || ||||| | || ||||| |||| Sbjct 11817 TCCACCGATAACCACTAAATCCAAGGTGTCGCCGACACCTTCTAGATAGTCTTTTTTCAA 11876 Query 197205 TTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTT 197264 ||| | ||| ||| |||||||||| |||||||| || || | |||| || || Sbjct 11877 TTTTAACCAATTTCGAGATCTCTTGTTTATCTCGTAAGTAGCTTCGGTATCCAAAGTTTT 11936 Query 197265 GATCATCAATCCCTCGCA 197282 | ||||| ||| ||||| Sbjct 11937 CACCATCAGTCCTTCGCA 11954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676221189969760