Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq39349 102 2e-16 >seq39349 Length=17693 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 ||||||||||| | ||||| | ||| ||||| || || ||||| ||| ||||| ||| Sbjct 11627 AGACCAGGCATTAGGCCCCTTTTTTTAAGCCAAAATATAGCCGCAAAACTTCCAGAAAAG 11568 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 || || || || || || || ||||| ||| |||||||| |||| ||||||| || Sbjct 11567 AAAATCCCTTCGACAGCAGCAAACGCAATGATTCTCTCTCCAAAAGTCGCGTTCTGATCC 11508 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 | ||||| | |||||||||||| || | |||| || ||||| || || || || Sbjct 11507 GCTATCCATCTTAACGCCCAGTCTGCTTTTCTTTTGACACAAGGCATGGTTTCAATTGC 11449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930832962695680