Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4462 82.4 9e-11 >seq4462 Length=45351 Score = 82.4 bits (90), Expect = 9e-11 Identities = 163/240 (68%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 |||||||| ||| |||| ||||| | | || |||||||| |||| ||| |||||| Sbjct 16881 GGGACAAACGGTGTATCAAATGGTCTCGTGCCGATGCTTCGGGTATATAATAACACAGCC 16822 Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACC 75618 | ||||| |||||| | ||| | ||| || | |||| || ||||||||||| Sbjct 16821 AGATATGTCGATCAAG-GAGGCAACAAAAGACCCGGCGCTTTCGCAGTTTACTTGGAACC 16763 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||| ||||||| | || ||| | ||| | ||| ||| ||| | ||||| | Sbjct 16762 TTGGCATTCCGATATTTTTGATTTCTTAGAGCTTCGAAAAAACTCTGGTAAAGAAGAATC 16703 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| ||| ||| | || | | || ||||| || || || |||| || ||||| Sbjct 16702 TCGCGCTAGGGATTTATTCTACGCGCTATGGATCCCTGATGAGTTTATGAGACGCGTTGA 16643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596121412173760