Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq19949 98.7 3e-15 >seq19949 Length=33308 Score = 98.7 bits (108), Expect = 3e-15 Identities = 233/345 (68%), Gaps = 18/345 (5%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG---AATTTT--GTCTCGCA 289083 |||||| || ||||||||||| || |||||||| || || | ||||| | | ||| Sbjct 15569 ACCAACGGCGTCAATTTCGTCGATAAAAATCACGCAAGGTGCTCGATTTTTAGCCGCGC- 15511 Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143 || ||||| || | ||||| || || | || || | ||||| | ||||| Sbjct 15510 --TG--AATAAATCACGAACACGACGAGCACCTTGCCCGACTAATATTTCATCGAATTCC 15455 Query 289144 GAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203 ||| | | | | || | || | ||| |||||||| || || || | || | | Sbjct 15454 GAACCAGCTGCGTGGAAAAAAGGAACACCGGCTTCGCCAGCCACAGCTCGAGCTAACAAA 15395 Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC---A 289260 || || |||||||| || ||||| |||||| | || ||||||| ||| | || Sbjct 15394 GTTTTTCCTGTTCCCGGCGGTCCTACTAATAATGCGCCTTTTGGTAGTTTACCACCTAAT 15335 Query 289261 GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320 || || | |||| || || | |||||||| ||||| ||||| | |||||| | ||| Sbjct 15334 GCTGA---AAATTTTTCCGGATTTTTTAAAAACTCTACGATTTCTTGAAGTTCTTGTTTA 15278 Query 289321 GCCTCATC-ACATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364 || ||||| ||| ||| |||||| |||| || |||| ||| || Sbjct 15277 GCTTCATCTACA-CCTTTGACATCATCAAACGTTATATCAATGTC 15234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470684216738374