Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq37708 163 2e-35 seq48073 149 5e-31 seq28516 87.8 1e-12 seq8389 87.8 1e-12 >seq37708 Length=8338 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| || || ||||| ||||| || ||||||||||| |||||||| |||| | Sbjct 4871 CCGCCTCTCAGTCGGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTATAGTCCGAA 4930 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || ||||||||||| ||||| | || | | ||||||||| || || Sbjct 4931 AGGGTTCTACCGTCTTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCGGGAGGG 4990 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| ||||| | ||| |||||| |||| | |||||| | |||||| Sbjct 4991 ATGCCTTCTTTATCTTGGATTTTCGCTTTGACGTTTTCGATAGTGTCGCTCGGCTCTACT 5050 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || ||||| ||||| || ||||||||||| ||||||||||| Sbjct 5051 TCGAGGGTGATGGTTTTACCAGTCAACGTTTTAACAAAGATCTGCATTTT 5100 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || || || |||||||| || |||||||| ||||||||||||||||| | | Sbjct 3503 CCACCTCTTAATCGGAGAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAATCGGAA 3562 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| |||||||||||||| || | || | | |||||| || || ||| Sbjct 3563 AGGGTACGGCCATCTTCGAGTTGTTTGCCGGCGAAAATAAGACGTTGCTGGTCGGGAGGA 3622 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| ||||| |||||| | ||||| |||| | |||||| | ||||| Sbjct 3623 ATTCCCTCTTTATCTTG-AATTTTGGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTAC 3681 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || || ||||| || |||||||| || || || ||||| Sbjct 3682 TTCTAACGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 3729 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || || || ||||| ||||| || ||||||||||| ||||| ||||||| | Sbjct 4415 CCGCCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCCGAA 4474 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| ||||| ||||| || || | || | | ||||||||| |||||| Sbjct 4475 AGGGTTCTACCATCTTCGAGCTGTTTACCGGCGAAGATGAGACGTTGCTGATCGGGCGGA 4534 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| |||||| | |||||| |||| | |||||| | | || || Sbjct 4535 ATGCCTTCCTTATCTTG-AATTTTCGCCTTGACATTTTCAATCGTGTCACTAGGCTCGAC 4593 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || ||||| || ||||| ||||| || || ||||||||||| Sbjct 4594 TTCCAATGTGATAGTCTTACCAGTCAAGGTCTTGACGAATATCTGCAT 4641 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||||||| || |||||||| | ||| ||||||||||| || |||||||| | Sbjct 4643 CCACCTCTCAAACGGAGTACCAAATGCAACGTAGATTCTTTTTGGATATTATAATCGGAC 4702 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| ||||| |||||||| ||| | ||||| | ||| || || || || Sbjct 4703 AAGGTCCTTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAAACGTTGTTGGTCGGGAGGG 4762 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| |||| | |||||| | | || ||| Sbjct 4763 ATGCCTTCTTTGTCTTGGATTTTAGCCTTCACATTTTCGATAGTGTCGCTAGGCTCGACT 4822 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || |||||||| || |||||||| || || || ||||| Sbjct 4823 TCGAGGGTAATCGTTTTGCCGGTCAAGGTTTTTACGAAAATTTGCAT 4869 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| |||| |||||||| | ||| |||||||||||||| ||||| |||| Sbjct 3959 CCGCCTCTCAATCGCAAAACCAAATGCAACGTCGATTCTTTTTGAATATTATAGTCCGAG 4018 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || ||||||||||| || || | || || | |||||| || || ||| Sbjct 4019 AGAGTCCTACCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGCTGGTCGGGGGGA 4078 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| ||||| |||||| | |||||| |||| | ||||| | || || Sbjct 4079 ATTCCCTCTTTATCTTG-AATTTTGGCCTTGACATTTTCGATCGTGTCGCTTGGCTCGAC 4137 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||| || || |||||||| || || || ||||| Sbjct 4138 TTCGAGTGTGATGGTTTTTCCTGTCAAGGTTTTTACGAAAATTTGCAT 4185 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| || ||||||||||| | || || |||||||| ||||| ||||| | Sbjct 4187 CCTCCCCTCAATCGAAGCACCAAATGTAAAGTCGACTCTTTTTGGATGTTGTAATCGGAG 4246 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | |||||| || || | || | | |||||| || || ||| Sbjct 4247 AGCGTTCTACCGTCTTCCAATTGTTTACCGGCGAAAATGAGACGTTGCTGGTCGGGAGGA 4306 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| ||||| |||||| | || ||| |||| | ||||| | | || || Sbjct 4307 ATTCCCTCTTTATCTTG-AATTTTAGCCTTTACATTTTCGATGGTGTCGCTAGGCTCAAC 4365 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || |||||||| || |||||||| || || || ||||| Sbjct 4366 TTCGAGGGTAATCGTTTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 4413 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| || || || ||||| || ||||||||||| || ||||| || |||| Sbjct 3731 CCACCTCTCAATCGAAGAACTAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCCGAG 3790 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| ||||||||||| || || | || | | ||| ||||| || || Sbjct 3791 AGAGTTCTTCCATCTTCGAGTTGTTTACCGGCGAAGATGAGACGTTGTTGATCGGGTGGG 3850 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| ||| || |||| | || || | | || ||| Sbjct 3851 ATTCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTTTCGATCGTATCGCTAGGCTCGACT 3910 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || ||||| || || || || |||||||| Sbjct 3911 TCGAGTGTGATTGTTTTACCGGTTAACGTCTTTACGAAAATCTGCAT 3957 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| ||||| || | ||| || || |||||||| |||||||||| || || | | | Sbjct 3287 CGCAATACCAAGTGCAACGTAGACTCCTTTTGAATATTATAATCCGAAAGCGTTCTACCA 3346 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || || || || | || | | |||||||||||| || ||||| |||||| Sbjct 3347 TCTTCGAGCTGCTTTCCGGCGAAAATTAGACGTTGCTGATCCGGAGGGATACCTTCTTTG 3406 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || || |||| | || || | | || ||||| || || || Sbjct 3407 TCTTGGATTTTCGCCTTAACGTTTTCGATCGTATCGCTAGGCTCGACTTCGAGGGTGATG 3466 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || || || |||||||| Sbjct 3467 GTTTTACCTGTCAACGTCTTGACGAAGATCTGCAT 3501 >seq48073 Length=7537 Score = 149 bits (164), Expect = 5e-31 Identities = 165/215 (77%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATC 29633 ||||||||||| ||||| |||||||| |||||||||||||| | ||| | | || || Sbjct 6724 AGCACCAAATGTAGCGTAGATTCTTTCTGAATGTTATAATCGCTCAAAGTT-CGGCCGTC 6666 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | |||||| || || | |||||||||||||| || || || ||||| |||||||| Sbjct 6665 TTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCGGGTGGGATACCTTCTTTGTC 6606 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| |||||| | ||| ||| |||| | || || || |||| || || | || || | Sbjct 6605 TTG-AATTTTGGCTTTCACATTTTCAATGGTATCGGACGGTTCAACCTCCAACGTAATGG 6547 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| ||||| || ||||| ||||| || |||||| Sbjct 6546 TTTTACCAGTCAAAGTTTTTACAAAAATTTGCATT 6512 Score = 131 bits (144), Expect = 1e-25 Identities = 167/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||||| ||||||||||| ||||||||||||||||| || || || | ||| | | || Sbjct 5588 ACGCAAGACCAAATGAAGGGTGGATTCTTTTTGAATATTGTAGTCGCTCAAAG-TACGTC 5530 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 || || | ||||| || || | || || | ||||| || || || ||||| |||| Sbjct 5529 CGTCTTCCAACTGTTTTCCGGCGAAAATTAACCGCTGCTGGTCGGGTGGGATACCTTCTT 5470 Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 | ||||| |||||| | ||||||| |||| | ||||| || |||| ||||| | || Sbjct 5469 TATCTTG-AATTTTAGCTTTGACATTTTCAATGGTGTCGGACGGTTCGACTTCTAAGGTG 5411 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 || || || ||||| | ||||||||||| |||||||| || ||| Sbjct 5410 ATGGTCTTTCCAGTAAGAGTTTTAACAAAAATCTGCATCTTGAAA 5366 Score = 125 bits (138), Expect = 5e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATC 29636 || |||||||| ||||||||||| || || || || || | ||| ||| || || || Sbjct 6037 ACTAAATGAAGAGTGGATTCTTTCTGGATATTGTAGTCGCTCAA-GGTACGTCCGTCTTC 5979 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | |||||||||||| | || |||| |||||| || || || ||||| ||||| ||||| Sbjct 5978 TAATTGTTTGCCAGCGAAAATTAATCGTTGCTGGTCGGGTGGGATACCTTCTTTATCTTG 5919 Query 29697 TAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 |||||| | ||| || |||| | || || || ||||||| || || || ||||| | Sbjct 5918 -AATTTTCGCTTTCACGTTTTCGATGGTATCTGATGGTTCTACCTCCAGCGTAATAGTCT 5860 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || || || |||||||| || || |||||| Sbjct 5859 TTCCGGTCAAAGTTTTAACGAAAATTTGCATT 5828 Score = 122 bits (134), Expect = 7e-23 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||||| || || ||||| || || |||||||||||||| ||||| | ||| | | || Sbjct 6500 ACGCAAGACTAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAATCGCTCAAAGTT-CGGC 6442 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 || || | ||||| || || | || || | ||||| || || ||||| || |||| Sbjct 6441 CGTCTTCCAACTGTTTTCCGGCGAAAATTAACCGCTGCTGGTCGGGTGGAATGCCTTCTT 6382 Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 | || || |||||| | |||||| |||| | || ||||| |||||||||| || || Sbjct 6381 TATCCTG-AATTTTAGCTTTGACGTTTTCAATCGTATCAGACGGTTCTACTTCCAGGGTA 6323 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || ||||| ||||||||||| || ||||| Sbjct 6322 ATGGTTTTACCGGTTAACGTTTTAACAAAAATTTGCAT 6285 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| | ||||||||||| || || |||||||||||||| ||||| Sbjct 6967 CCTCCACGAAGACGTAAAACCAAATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGCTC 6908 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| || || | ||||| |||||| | ||||||| ||||| || ||||| Sbjct 6907 AGAGTACGACCGTCTTCCAACTGTTTACCAGCAAAGATCAATCGCTGCTGGTCAGGCGGG 6848 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| || || |||||| | || || |||| | ||| || || ||||||| Sbjct 6847 ATTCCTTCTTTATCCTG-AATTTTGGCCTTCACGTTTTCGATAGTATCGGACGGTTCTAC 6789 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || || || || |||||||| || || |||||| Sbjct 6788 CTCCAGCGTAATCGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 6740 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || |||||||||||||| |||||||| | || || || || Sbjct 6265 ACCAAATGGAGGGTAGATTCTTTTTGAATATTATAATCGCTGAGAGTACGGCCGTCTTCC 6206 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||||| || || | |||||||| ||||| || || || ||||| ||||| |||||| Sbjct 6205 AACTGTTTACCGGCGAAGATCAATCTCTGCTGGTCGGGTGGGATACCTTCTTTATCTTGT 6146 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | || |||||| |||| | ||||| || |||| ||||| | || || ||||| Sbjct 6145 ATCTTGGCTTTGACGTTTTCGATGGTGTCGGACGGTTCCACTTCCAAGGTGATGGTTTTT 6086 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | ||||||||||| || ||||| Sbjct 6085 CCGGTGAGCGTTTTAACAAAAATTTGCAT 6057 Score = 111 bits (122), Expect = 1e-19 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATC 29633 ||||||||||||||||| |||||||| |||||||||||||| | ||| || || || Sbjct 5812 AGCACCAAATGAAGCGTAGATTCTTTCTGAATGTTATAATCGCTCAA-AGTTCGGCCGTC 5754 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | ||| || || || | ||||||||||| || || || || || || || ||||| Sbjct 5753 TTCCAATTGCTTCCCGGCGAAGATCAATCTTTGTTGGTCGGGTGGGATGCCTTCCTTGTC 5694 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| || | ||| || | || | || || || | |||||||| | || || | Sbjct 5693 CTG-AATCTTAGCTTTAACGTTCTCGATGGTATCGGACGGCTCTACTTCCAACGTAATGG 5635 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || ||||| || || || || || ||||| Sbjct 5634 TTTTACCGGTTAACGTCTTGACGAAAATTTGCAT 5601 >seq28516 Length=38763 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| ||||| | || |||||||| | || ||||||||||| |||||||| || | Sbjct 20550 TCCTCCTCTCAATCTCAATACCAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCGGA 20491 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| || ||| ||||| || || ||||| | ||||| | |||||| || || || Sbjct 20490 AAGGGTACGTCCATCTTCGAGCTGCTTACCAGCGAAAATCAAACGTTGCTGGTCAGGAGG 20431 Query 29679 AATACC 29684 ||| || Sbjct 20430 AATGCC 20425 >seq8389 Length=28122 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 29682 ACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTC 29741 ||| ||||||||||||| ||| ||| ||| |||| | | | ||| | |||| || || Sbjct 12744 ACCTTCTTTGTCTTGTATTTTGGCTTTTACATTTTCAATACTATCACTAGGTTCGACCTC 12685 Query 29742 AAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| || ||||| ||||| ||||| |||||||| || || |||||||| Sbjct 12684 AAGGGTGATAGTCTTGCCCGTTAAAGTTTTAACGAAAATTTGCATTTT 12637 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || || || | || ||||| | ||| ||||||||||||||||| ||||| | Sbjct 12957 TCCTCCTCTTAATCGTAATACTAAATGCAACGTCGATTCTTTTTGAATGTTGTAATCAGA 12898 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || |||||||| ||||| | ||||| | ||| ||||| || || Sbjct 12897 AAGAGTTCTTCCATCTTCAAGTTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGAGG 12838 Query 29679 AATACC 29684 ||| || Sbjct 12837 AATGCC 12832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384937029584382