Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq4462 104 2e-17 >seq4462 Length=45351 Score = 104 bits (114), Expect = 2e-17 Identities = 212/309 (69%), Gaps = 12/309 (4%) Strand=Plus/Minus Query 31255 TAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAA 31314 ||||| || |||||||| |||||||| | |||| |||||||||||||||||| | | Sbjct 38805 TAACTGGCGATGTTGAAAGGTACACCAAGACCCATATCGGCAGATCGTTGATACATTTGA 38746 Query 31315 CAGGAAAGTT---CATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAAA 31371 || || |||| ||| | | ||||||| || | || ||||| || || || Sbjct 38745 CACGATAGTTCGCCATTAACTG---CGTAAAACTGCACCAAGCAGTGACACGGAGGTAAG 38689 Query 31372 GCCATTTCACAGGT--ATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTG 31429 ||||||| |||| ||| | |||||||||||||| || | | | | | | | Sbjct 38688 GCCATTT--TAGGTAAATCAATGGGATTCCAAGCGCATAGGATTATTCTTCTATCGTCGG 38631 Query 31430 GATCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTATAAT 31489 ||| | |||||| ||||| ||| | | ||||||||| |||| ||||||| Sbjct 38630 GATTATTTTTAATCGTGTCTATGACGTTTTGAAGTTGATCGATGCCTTTGTTTGTATAAT 38571 Query 31490 TACTAT-CACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGT 31548 | | | || || | ||||| | || || ||||||| |||||| ||||| |||| ||| Sbjct 38570 CAGTGTGCATAT-CTTTGTACTCGGCTCCAAAATGTCTCCATTGGAACCCGTAAACAGGA 38512 Query 31549 CCCAGGTCA 31557 || || ||| Sbjct 38511 CCAAGATCA 38503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512632182702560