Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq19275 95.1 1e-14 >seq19275 Length=7014 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 32719 TTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATT 32778 ||||||| || | || || ||| || ||| ||| ||||| ||||| || || |||| Sbjct 4688 TTTTCTTTATTCTTAGGAAAAAAGACAAACAACTTACATTTTTACACGTGTATCATCATT 4747 Query 32779 TTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGGCATTTT 32838 || || || | ||| | ||||| || || |||| | || | || | | |||| Sbjct 4748 CGACAATTTTCTCATTATGGTGGATCGGTATAAAATACGTACCAAGTGGCTCGACGTTTT 4807 Query 32839 TTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGATTAACAG 32898 | ||| | | ||| | || |||||| | ||||||| ||||||||| ||| | | Sbjct 4808 TCCCTGCAATGGTCAATAGCTCAATTCATGTTCTGATGTATACTTATTACGGTTTAGCTG 4867 Query 32899 CAATAGGTCCTTCC-TTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATCATACAA 32957 |||| || ||| | |||||||| ||| | ||||||||||||||||| || || | ||| Sbjct 4868 CAATGGGCCCTACAATTGCGAAA-TATTTGTGGTGGAAAAAATATTTGACAATGCTTCAA 4926 Query 32958 TTGATG 32963 || || Sbjct 4927 CTGGTG 4932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602727645344480