Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4462 100 2e-16 >seq4462 Length=45351 Score = 100 bits (110), Expect = 2e-16 Identities = 173/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 29720 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCG 29779 || || ||||| ||||| |||||||| |||||||| ||||||||||| || || || || Sbjct 38838 GTAACATGAGCAATCATATACGTGAGCAGAGAGTAACTGGCGATGTTGAAAGGTACACCA 38779 Query 29780 AGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAA 29839 || ||||| || | || | || || | || ||||| || || || | ||||| Sbjct 38778 AGACCCATATCGGCAGATCGTTGATACATTTGACACGATAGTTCGCCATTAACTGCGTAA 38719 Query 29840 AACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCA 29898 ||||| ||| ||| || |||||||| | |||||| | || || |||| ||||| Sbjct 38718 AACTG-CACCAAGCAGTGACACGGAGGTAAGGCCATTTTAGGTAAATCAATGGGATTCCA 38660 Query 29899 GGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 29958 || || | ||| || | || || || || || || | || ||| | | ||||||| Sbjct 38659 AGCGCATAGGATTATTCTTCTATCGTCGGGATTATTTTTAATCGTGTCTATGACGTTTTG 38600 Query 29959 CAGCTGATC 29967 || ||||| Sbjct 38599 AAGTTGATC 38591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405865688248372