Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4462 140 2e-28 >seq4462 Length=45351 Score = 140 bits (154), Expect = 2e-28 Identities = 236/340 (69%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 27214 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 27273 || || ||||| ||||| |||||||| |||||||| ||||||||||| || ||||| || Sbjct 38838 GTAACATGAGCAATCATATACGTGAGCAGAGAGTAACTGGCGATGTTGAAAGGTACACCA 38779 Query 27274 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAA 27333 || ||||| || | || | || || | |||||||| || || |||| | ||||| Sbjct 38778 AGACCCATATCGGCAGATCGTTGATACATTTGACACGATAGTTCGCCATTAACTGCGTAA 38719 Query 27334 AACTGACATATGGCGTGGCACGGAGGAAGAGCCA--TGAGGCCCAAGTCTTTGGGGTTCC 27391 ||||| | | ||| |||||||| | |||| | ||| || || |||| |||| Sbjct 38718 AACTGCACCAAGCAGTGACACGGAGGTAAGGCCATTTTAGG--TAAATCAATGGGATTCC 38661 Query 27392 AGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTT 27451 | ||||| | ||| || | || || || || || || | || ||| | | |||||| Sbjct 38660 AAGCGCATAGGATTATTCTTCTATCGTCGGGATTATTTTTAATCGTGTCTATGACGTTTT 38601 Query 27452 GCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGA 27511 | || ||||| | || | | || || ||| || ||||||| ||||| | Sbjct 38600 GAAGTTGATCGATGCCTTTGTTTGTATAATCAGTGTGCATATCTTTGTACTCGGCTCCAA 38541 Query 27512 AATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 |||| ||||||||||||||||| || || || || || || Sbjct 38540 AATGTCTCCATTGGAACCCGTAAACAGGACCAAGATCACC 38501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369236538516362