Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccus_20marginatus_20[genbank_20GCA_5F900065295.1_202016-03-26] 60,102 sequences; 191,208,351 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq4462 129 8e-25 >seq4462 Length=45351 Score = 129 bits (142), Expect = 8e-25 Identities = 237/341 (70%), Gaps = 10/341 (3%) Strand=Plus/Plus Query 50471 CAAAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACAT 50530 || ||| ||| | || ||||||||||| || |||||||||||||||||||| |||| Sbjct 38497 CACAGGTGATCTTGGTCCTGTTTACGGGTTCCAATGGAGACATTTTGGAGCCGAGTACAA 38556 Query 50531 AAAT-TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGA 50589 | || ||| || |||| | ||||| | |||||||| ||||| | ||| | Sbjct 38557 AGATATGC-ACACTGATTATACAAACAAAGGCATCGATCAACTTCAAAACGTCATAGACA 38615 Query 50590 CGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATA 50649 || | |||| || ||||||||| | | || | | ||| |||||||| | ||| Sbjct 38616 CGATTAAAAATAATCCCGACGATAGAAGAATAATCCTATGCGCTTGGAATCCCATTGATT 38675 Query 50650 TAGATCAAACCGTTTTACCTCCGTGTCA-TGTTTTATGTCAATTTTATGCCACAGACAAT 50708 || | ||| | |||||||||||||| || || || || ||||| | ||| ||| Sbjct 38676 TACCTAAAATGGCCTTACCTCCGTGTCACTGCTTGGTG-CAGTTTTA---CGCAGTTAAT 38731 Query 50709 ---GTTTTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTC 50765 | |||| |||||| |||||| |||| || ||||||||| | || || |||||| Sbjct 38732 GGCGAACTATCGTGTCAAATGTATCAACGATCTGCCGATATGGGTCTTGGTGTACCTTTC 38791 Query 50766 AACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 ||| | || |||| || | | |||||| |||| ||||| Sbjct 38792 AACATCGCCAGTTACTCTCTGCTCACGTATATGATTGCTCA 38832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666574043079120