Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq435 86.0 5e-12 seq4472 84.2 2e-11 >seq435 Length=3082058 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/149 (73%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 || ||||||||| ||| ||||||| | || |||||||||||| || || |||||| Sbjct 740747 AAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCAACAAAGGCTGATATTTGCG 740688 Query 29100 GGCAAACAACTGGAAGATTCCAAA---ACTATGGCCGATTACAATATTCAGAAGGAATCT 29156 || || || |||| || |||| ||| | | ||||| | ||||| || ||||| Sbjct 740687 GGTAAGCAGTTGGATGA---CAAACGCACTCTATCAGATTATGACATTCAAAAAGAATCA 740631 Query 29157 ACTCTTCACATGGTGTTACGATTACGAGG 29185 || |||||||||||| |||| || |||| Sbjct 740630 ACGCTTCACATGGTGCTACGTTTGAGAGG 740602 >seq4472 Length=7509737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| ||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| Sbjct 666581 AAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAGCAAAGGCTTATTTTTGCCGGAAAA 666522 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||| |||||| ||| || | || ||||| || ||||| ||||| || ||||| Sbjct 666521 CAACTAGAAGATGGTCGAACATTGTCAGACTACAACATACAGAAAGAATCCACACTTCA 666463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428249692036115