Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4472 109 5e-19 >seq4472 Length=7509737 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 || ||||| |||| ||||||||| || || || || |||||||| || | || || || Sbjct 668272 AGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGG 668331 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | || || ||||| ||||| ||| |||| | | |||||||| ||| | ||||| Sbjct 668332 CCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCT 668391 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| ||| || || || | | | || |||| ||| || ||||| ||| Sbjct 668392 TTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTT 668451 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||||| || || ||||||||||| || ||||| Sbjct 668452 ATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| ||| | || | ||| | ||||||||||| |||||||| ||||| | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | | ||||| |||||||| || || ||||||||||||| || || || Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| || || || || ||| || | | | |||||||| || || | Sbjct 667015 ATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACT 667074 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || || ||||| || || ||||| |||||||| ||||| Sbjct 667075 TCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||| | ||| |||| ||| | |||||| |||||||||||||| ||||| | Sbjct 666128 TTCCTCCTCTCAGACGGAGTACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCTG 666187 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||||| | | || || || || ||||| ||| |||| || | |||||| || | Sbjct 666188 AAAGGGTTCGCCCATCTTCAAGTTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGAG 666247 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| || ||| ||| || | | | |||||||| |||| Sbjct 666248 GGATACCCTCTTTGTCTTGAATTTTTGCTTTGACATTTTCAATAGTATCACTCTGCTCAA 666307 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACG 21156 ||| | ||||| |||||||| | |||| Sbjct 666308 CTTCTAAAGTAATTGTCTTGCCTGAAAACG 666337 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| | ||| | ||||| || | |||||| || ||||||||||||||||| | Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || |||||||| || ||| | ||||| || ||||| || || Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||| || ||| || | | | |||||||| ||||| | Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || || || || || | |||||||| || || ||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| |||||| | || | ||||||||| || || ||||| |||||||| || | Sbjct 667577 TTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTG 667636 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || | | || || ||||||||||| ||| |||| | | ||| ||||| | Sbjct 667637 ATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTG 667696 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || || || ||| ||| || || | | | || |||| ||||| Sbjct 667697 GAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAA 667756 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | || ||||| || || ||||| ||||||||||| |||||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| ||||| | |||| ||| | || || || ||||| ||||| || || | Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || | || || ||||| || || ||| |||| || | ||| || || || Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || || || |||||| | | | ||||||| || || | Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACT 667302 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| || || || || | |||||||||||||||||||| Sbjct 667303 TCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || ||| ||||||| || | || || || ||||||||||||||||||| Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || || ||||| || ||| |||| || | ||||| || || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||| || ||| || | | | ||||||| || || | Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCAT 668261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422174116486628