Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq435 95.1 1e-14 seq13703 89.7 4e-13 >seq435 Length=3082058 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 25113 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 25172 || ||||||||| ||| ||||||| | || |||||||||||| || || |||||| Sbjct 740747 AAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCAACAAAGGCTGATATTTGCG 740688 Query 25173 GGCAAACAATTGGAAGATTCCAAA---ACTATGGCCGATTACAATATTCAAAAGGAATCT 25229 || || || ||||| || |||| ||| | | ||||| | |||||||| ||||| Sbjct 740687 GGTAAGCAGTTGGATGA---CAAACGCACTCTATCAGATTATGACATTCAAAAAGAATCA 740631 Query 25230 ACTCTTCACATGGTGTTACGATTACGAGG 25258 || |||||||||||| |||| || |||| Sbjct 740630 ACGCTTCACATGGTGCTACGTTTGAGAGG 740602 >seq13703 Length=2289824 Score = 89.7 bits (98), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 25136 AGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAA 25195 |||| | ||| |||||||||||| | || ||||| |||||||| ||||||||| Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 25196 AACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 |||| | | ||||| || ||||||||||||||||||||||| Sbjct 2085226 AACTCTATCAGATTATAACATTCAAAAGGAATCTACTCTTCA 2085185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410714026113662