Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq13032 109 4e-19 >seq13032 Length=1420967 Score = 109 bits (120), Expect = 4e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 97035 CTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAAT 97094 ||| || || ||||||||||| |||| | ||| |||||||||||||| | ||||| | Sbjct 1333725 CTGTTCAGTAAGAGCATCAATATGATCGAGATATATGTGAGCATCTCCAATGGTGTGGAC 1333784 Query 97095 AAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCT 97154 ||| |||||||| | || || ||||| || ||||| | || | ||| || ||||| Sbjct 1333785 AAAATCTCCAGGCTTCAGATTTGTTACATGTGCAATCATGTAGGTAAGTAGTGAGTAGCT 1333844 Query 97155 AGCAATGTTAAAAGGCACCCCTAGTCCC 97182 |||||| |||||||| || ||||| ||| Sbjct 1333845 AGCAATATTAAAAGGTACTCCTAGACCC 1333872 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/170 (72%), Gaps = 8/170 (5%) Strand=Plus/Plus Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 ||||||||| ||| | |||||||||||| ||| ||| | ||| |||||||||| Sbjct 1335783 ATTCCAAGCTGACAGAATCATTCTTCTATCATGTGGCTTTTCTTTTATCATATTAATTAT 1335842 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCT-TG---ATATT 97405 | || || ||||| | ||||| | ||||| ||| | | | || ||| | Sbjct 1335843 GTATTTCAACTGATCTATTCCTTCATTAGAATAAT----CTTTACTCATATGGGTATAAT 1335898 Query 97406 CTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 |||| |||||||||| |||||| |||||||| ||||| || | ||||||| Sbjct 1335899 CTGCACCAAAATGCCGCCATTGAAATCCATACACAGGCCCTAAGTCTCCT 1335948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346714124432810