Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq4472 163 4e-35 seq435 136 6e-27 seq13703 111 2e-19 seq13032 91.5 2e-13 seq8847 86.0 9e-12 >seq4472 Length=7509737 Score = 163 bits (180), Expect = 4e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || ||||| || || || || ||| |||| ||||| ||| | Sbjct 668261 ATGCAGATTTTTGTTAAAACTCTAACTGGGAAGACAATTACTCTAGAAGTTGAACCAAGT 668202 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| ||||| ||||| ||||| ||||||||||| ||||||||||| Sbjct 668201 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAG 668142 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| ||||||||| | || ||| |||| || | || ||||| Sbjct 668141 CAACGTCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCGGACTATAAC 668082 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | || ||||| | | || |||||||||| Sbjct 668081 ATTCAAAAAGAATCTACACTTCACTTGGTGCTGAGGTTGAGAGGTGGTAT 668032 Score = 161 bits (178), Expect = 1e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| |||||||| |||||||| ||| ||||| | || | | | Sbjct 666665 ATGCAAATTTTCGTTAAGACTCTAACAGGAAAAACTATCACTTTAGAGGTAGAGCCCAGT 666606 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | ||| |||||||||||||||||||| || || || ||||| Sbjct 666605 GACACAATAGAAAACGTCAAAGCTAAAATTCAAGATAAAGAAGGAATCCCCCCAGATCAG 666546 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||||||||| ||||||||| |||| ||| |||||||||| ||| || || Sbjct 666545 CAAAGGCTTATTTTTGCCGGAAAACAACTAGAAGATGGTCGAACATTGTCAGACTACAAC 666486 Query 124719 ATTCAAAAAGAATCAAC 124735 || || |||||||| || Sbjct 666485 ATACAGAAAGAATCCAC 666469 Score = 159 bits (176), Expect = 5e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || |||| || || || |||||| |||| | || | | Sbjct 667578 AATGCAAATTTTTGTGAAAACTTTAACCGGAAAGACCATAACTTTAGAAGTAGAGCCTAG 667519 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| ||| | ||| |||||||||||||| ||||| || || || ||||| Sbjct 667518 TGATACAATTGAAAATGTGAAAGCAAAAATTCAAGATAAGGAAGGCATCCCTCCAGATCA 667459 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||| | ||||| || || || || ||||| ||| | ||||||| ||||| || Sbjct 667458 ACAAAGGTTGATTTTCGCTGGTAAGCAGTTAGAAGATGGAAGAACATTGTCCGATTACAA 667399 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||||||||| || | ||||||||| || | || || |||||||| Sbjct 667398 TATCCAAAAAGAATCCACCCTCCATTTGGTTCTAAGATTGCGTGGTGGTAT 667348 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | || ||| | || |||||||| |||||| | || | ||| | | | Sbjct 667121 ATGCAGATATTTGTGAAAACATTGACTGGCAAAACAATAACTTTGGAAGTAGAACCTAGT 667062 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct 667061 GATACTATTGAAAACGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCAA 667002 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || |||||||| || |||||||| |||||||| |||||||| | ||| || || Sbjct 667001 CAGAGACTTATTTTCGCTGGAAAACAGCTAGAGGATGGTCGAACACTCTCAGACTACAAC 666942 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || | ||| | ||||| | || || |||||||| Sbjct 666941 ATTCAGAAGGAGTCCACACTTCATCTTGTTTTGAGGTTGCGTGGTGGTAT 666892 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || ||||| |||||||| || |||| ||||| ||| | Sbjct 667349 ATGCAAATATTTGTCAAAACTCTGACAGGAAAAACTATTACACTAGAAGTTGAACCAAGT 667290 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | ||| |||||||||||||| |||||||| ||||| |||||| Sbjct 667289 GATACCATAGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCCGATCAA 667230 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || |||||||| || || || | || ||| | ||||| | |||||| || Sbjct 667229 CAGCGTCTGATTTTTGCTGGTAAGCAGCTTGAAGATGGCCGAACCCTCTCAGATTACAAC 667170 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || | ||| ||||||| | | ||||||||||| Sbjct 667169 ATCCAAAAAGAATCTACACTCCATCTGGTTTTGAGGCTTCGAGGTGGTAT 667120 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || ||||| || || |||||||| || |||| | || | | | Sbjct 668033 ATGCAGATTTTCGTCAAAACACTTACTGGTAAAACTATCACATTAGAAGTAGAGCCTAGT 667974 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | ||| ||||| ||||| || ||||| || || |||||||| Sbjct 667973 GATACTATTGAGAACGTTAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAG 667914 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| |||||||| ||||| | || ||| |||| || | ||| ||||| Sbjct 667913 CAAAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGTCGCACTCTTTCAGACTATAAC 667854 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||| ||| | || ||||| || | ||| |||||||||| ||| || Sbjct 667853 ATTCAAAAAGAATCCACTCTCCACTTGGTGTTGAGGTTAAGAGGTGGTATGCAAATTT 667796 Score = 140 bits (154), Expect = 5e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||| || |||||||| |||||||| ||| ||||| ||||| ||| | Sbjct 666893 ATGCAGATCTTCGTAAAAACTCTAACAGGGAAAACTATTACTTTAGAGGTTGAACCAAGT 666834 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || || ||||||||||||||||| || || || ||| Sbjct 666833 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGATAAAGAAGGTATTCCTCCCGACCAA 666774 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || || ||||| || || || ||||| ||| | || || ||| || ||||| Sbjct 666773 CAACGTCTGATCTTTGCCGGGAAGCAGTTAGAAGATGGCCGCACCTTATCTGACTATAAC 666714 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 || ||||| || ||||| || ||| | || || Sbjct 666713 ATCCAAAAGGAGTCAACATTACATCTTGTGTT 666682 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || |||| || ||||| || || |||| |||| | | | Sbjct 667805 ATGCAAATTTTTGTCAAAACTTTAACTGGAAAAACCATCACATTAGAAGTTGAGCCTAGT 667746 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| |||| ||||| ||||||||||| ||||| |||||||| ||| Sbjct 667745 GACACCATAGAAAATGTAAAGGCAAAAATCCAAGATAAAGAGGGTATTCCACCTGACCAA 667686 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || ||||| | || ||| | || |||||| ||||||||| Sbjct 667685 CAGCGTTTAATTTTTGCCGGCAAACAGCTTGAAGATGGGCGTACATTATCAGATTATAAC 667626 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 || ||||||||||| ||||||||| | || || Sbjct 667625 ATCCAAAAAGAATCTACTTTGCATCTTGTATT 667594 Score = 132 bits (146), Expect = 7e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | |||||| |||| ||||||||||| || ||||| |||| | | Sbjct 668718 AATGCAGATTTTTGTTAAGACATTAACTGGCAAAACTATCACACTAGAGGTTGAGCCTAG 668659 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | ||| || || || || |||||||| || ||||||||||| Sbjct 668658 TGACACGATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGAATTCCACCTGATCA 668599 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || || || || || ||||| || ||| |||| || | || || || Sbjct 668598 GCAGAGGTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGTACCCTGTCTGACTACAA 668539 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| |||||||| || | || |||||| || | || |||| ||||| Sbjct 668538 TATTCAGAAAGAATCTACACTTCACTTGGTTCTAAGATTGAGAGGAGGTAT 668488 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || | || ||||| || ||||| | || ||||| | | | Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| |||| ||||| ||||| ||||||||||| || ||||| || Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || || || | || ||| | || ||| | ||||||||| Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCAGATTATAAC 668310 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747 || || ||||||||||||||||||||||| Sbjct 668309 ATACAGAAAGAATCAACTTTGCATTTGGT 668281 Score = 113 bits (124), Expect = 7e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 124564 CAGGCAAAACTATAACTATAGAGATTGAAGCAAA-TGATACAATTTCTAATTTAAAACAG 124622 ||||||| || || ||| |||| |||| ||| | |||||| ||| ||| | ||| Sbjct 666331 CAGGCAAGACAATTACTTTAGAAGTTGA-GCAGAGTGATACTATTGAAAATGTCAAAGCA 666273 Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||||||||| ||||| ||||| || || ||||| || | || |||||||| || || Sbjct 666272 AAAATTCAAGACAAAGAGGGTATCCCTCCCGATCAGCAGCGTCTCATTTTTGCCGGCAAG 666213 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || ||| | ||||| | ||| || || |||||||| ||||| ||| | ||| Sbjct 666212 CAACTTGAAGATGGGCGAACCCTTTCAGACTACAACATTCAAAAGGAATCCACTCTTCAT 666153 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| | ||| | |||| || || Sbjct 666152 TTGGTACTCCGTCTGAGAGGAGGAAT 666127 >seq435 Length=3082058 Score = 136 bits (150), Expect = 6e-27 Identities = 192/266 (72%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| |||| || || || || ||||| |||||| | || | || | Sbjct 740826 AATGCATATTTTTGTAAAAACCCTGACTGGAAAAACAATAACTCTTGAAGTAGAGTCGTC 740767 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || || | | ||||| |||||||||||| ||||||| || || || ||||| Sbjct 740766 TGACACCATCAATATTGTGAAACAAAAAATTCAAGATGAAGAAGGAATTCCTCCAGATCA 740707 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||||| || ||||| || || || || || || | || || || ||||||| | Sbjct 740706 ACAAAGGCTGATATTTGCGGGTAAGCAGTTGGATGACAAACGCACTCTATCAGATTATGA 740647 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGG-TGGTATTAAAAATT 124776 ||||||||||||||||| | || |||| ||||||| |||| | || ||||| | Sbjct 740646 CATTCAAAAAGAATCAACGCTTCACATGGTGCTACGTTTGAGAGGCCGATAGTAAAA--T 740589 Query 124777 CATAAAAAT-TGATTGTAAATAAATA 124801 | || ||| | ||| || |||||| Sbjct 740588 GAAAACAATATACTTGGAATTAAATA 740563 >seq13703 Length=2289824 Score = 111 bits (122), Expect = 2e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 |||||| || |||||||||||||| | |||||||| || ||||| || || ||| | || Sbjct 2085286 AGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCCGGCAAACAGTTGGAAGATGGACG 2085227 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||| || ||||||||| |||||||| ||||| ||| | ||||| ||| | ||||| | Sbjct 2085226 AACTCTATCAGATTATAACATTCAAAAGGAATCTACTCTTCATTTAGTTCTTCGTTTGAG 2085167 Query 124760 AGGTGGTATTA 124770 |||||| ||| Sbjct 2085166 GGGTGGTGTTA 2085156 >seq13032 Length=1420967 Score = 91.5 bits (100), Expect = 2e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatA 205677 |||||||| |||| | || || ||||| | || || | |||||| |||| || Sbjct 1335781 GGATTCCAAGCTGACAGAATCATTCTTCTATCATGTGGCTTTTCTTTTATCATATTAATT 1335840 Query 205678 ATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTA 205737 || | | | || ||||| | ||||| ||| | ||||| | || ||||| |||| | Sbjct 1335841 ATGTATTTCAACTGATCTATTCCTTCATTAGAATAATCTTTACTCATATGGGTATAATCT 1335900 Query 205738 GCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 ||||||||||| ||||||||||| ||||| || || ||||| || ||| Sbjct 1335901 GCACCAAAATGCCGCCATTGAAATCCATACACAGGCCCTAAGTCTCCT 1335948 >seq8847 Length=10843265 Score = 86.0 bits (94), Expect = 9e-12 Identities = 102/143 (71%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 |||||||| ||||| |||||||| ||||||| | ||||| ||||| |||| Sbjct 8080761 CCAACATAGCCATTAGGATCACGACCATCTAAATTGTATTTGTCATTAAAATATATAGCA 8080820 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 |||||||| || || || |||||||| | |||||| || ||||||||||| Sbjct 8080821 AATTCTAATGCTTCCTCAGGGCTGTTGGTCCATTCCAGTATTTTCTTTGCCCAATACATG 8080880 Query 202988 CTTAAATATCCATGCATTTTACC 203010 | | | | ||||||||||| || Sbjct 8080881 CGAAGAAAACCATGCATTTTCCC 8080903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755299875574400