Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq546 131 2e-25 >seq546 Length=398126 Score = 131 bits (144), Expect = 2e-25 Identities = 152/204 (75%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 16622 AAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAA 16681 |||||||| || || ||||||||||| || |||||||| || | || || || || Sbjct 243757 AAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGAAG 243698 Query 16682 tttttttCGTTATCTGAA---AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACC 16738 | |||||| | |||| |||||| |||||||||||| |||||||||| ||| || Sbjct 243697 TGTTTTTCTT---CTGATTTCAGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTACT 243641 Query 16739 TCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAA 16798 |||||||| ||||| ||||| || | || || |||||||| | ||| || |||| || Sbjct 243640 TCTTCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATAT 243581 Query 16799 ACAATAGGAAACACAACATACTTA 16822 |||| ||||| | |||| || || Sbjct 243580 TCAATGGGAAAGATAACAAACCTA 243557 Score = 104 bits (114), Expect = 2e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 15886 TTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTG-ACATTT 15944 ||||||||| ||| || | || |||| ||||| ||| |||||||||||| ||| || Sbjct 257352 TTAAAAATCTGCATCGAGGGTGAAAACATGATCTTCTTTGTTTGACATAACTCCACACTT 257293 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 || | ||||| | |||| |||| ||||||||||| ||||| || || | |||| || Sbjct 257292 TTGG-TATTCTCCAACTTTCTTCTCAAAGAAATTGGTTTTGCCCTCAAGACTGATATGTT 257234 Query 16005 CCATAAAATCAAAAGGATTTT 16025 |||| |||||||| ||||||| Sbjct 257233 CCATGAAATCAAATGGATTTT 257213 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563 || ||| ||||| |||| || || |||||||||||||| | |||||| || ||||| || Sbjct 245610 AACATATGTATCAATTAACAAGCTGTACATTTCTGAATGGACATTCTCAATAGCTATTTG 245551 Query 16564 AAAACCATAAAAGCATCTAGCTTC 16587 |||||||||||| ||||| || || Sbjct 245550 AAAACCATAAAAACATCTGGCCTC 245527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462416416113800