Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq13032 95.1 1e-14 >seq13032 Length=1420967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||| || || || ||||| |||||||| || || | || ||||| || ||||||||||| Sbjct 1333872 GGGTCTAGGAGTACCTTTTAATATTGCTAGCTACTCACTACTTACCTACATGATTGCACA 1333813 Query 20550 TGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCT 20609 ||| ||| || | || | || || || ||||||||||| ||||| || || || || || Sbjct 1333812 TGTAACAAATCTGAAGCCTGGAGATTTTGTCCACACCATTGGAGATGCTCACATATATCT 1333753 Query 20610 TAATCATATAGA 20621 ||||||| || Sbjct 1333752 CGATCATATTGA 1333741 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || || || ||||||||||||||||||||| | |||||||| || || ||| | Sbjct 1335947 GGAGACTTAGGGCCTGTGTATGGATTTCAATGGCGGCATTTTGGTGCAGATTATACCCAT 1335888 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 |||| | | |||||| | ||||| ||||||| || || | | |||||| | || Sbjct 1335887 ATGAGTAAAGATTATTCTAATGAAGGAATAGATCAGTTGAAATACATAATTAATATGATA 1335828 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAA 20381 ||| || ||| | || |||||||| ||| | | || ||||| Sbjct 1335827 AAAGAAAAGCCACATGATAGAAGAATGATTCTGTCAGCTTGGAA 1335784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399103566045685