Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4472 98.7 8e-16 >seq4472 Length=7509737 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||||||||| |||||||| || || || |||||||| |||||||| | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || |||| ||| || || ||||| ||||||| ||| || || || || Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || |||||| || ||| || || | | | |||| | | ||| ||| Sbjct 668611 ATTCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACC 668670 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 || | || || || ||||| || | ||||| ||||| || ||||| ||| || Sbjct 668671 TCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTTGACT 668724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394995593952193