Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq546 105 6e-18 >seq546 Length=398126 Score = 105 bits (116), Expect = 6e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 13848 ATAAAAACTAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGC 13907 ||| ||| |||||||| |||| | | ||||||| ||| |||||||| || ||||| | Sbjct 257359 ATATAAATTAAAAATCTGCATCGAGGGTGAAAACATGATCTTCTTTGTTTGACATAACTC 257300 Query 13908 CCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATA 13967 | ||||| ||||| | |||| | || |||||||| || ||||| || || || | Sbjct 257299 CACACTTTTGGTATTCTCCAACTTTCTTCTCAAAGAAATTGGTTTTGCCCTCAAGACTGA 257240 Query 13968 TATTTTCCATAAAATCAAATGGATTT 13993 ||| |||||| ||||||||||||||| Sbjct 257239 TATGTTCCATGAAATCAAATGGATTT 257214 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 |||| |||||||| || || ||||| || || |||||||| || || || | || | Sbjct 243759 CCAAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGA 243700 Query 14649 AGTATTGCTCTTC--ATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTAC 14706 ||| || ||||| ||| | ||||||| ||| || | || || || || |||||||| Sbjct 243699 AGTGTTTTTCTTCTGATTTC--AGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTAC 243642 Query 14707 TTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATA 14766 ||| || || ||||| ||| || | ||||| |||||||| ||| || |||| ||| Sbjct 243641 TTCTTCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATA 243582 Query 14767 TAATATAGGAAAAACTACAAATCT 14790 | || ||||| | ||||| || Sbjct 243581 TTCAATGGGAAAGATAACAAACCT 243558 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 14477 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14536 ||||||||||| | ||||| |||||||| || || | || || |||||||| |||||| Sbjct 245606 TATGTATCAATTAACAAGCTGTACATTTCTGAATGGACATTCTCAATAGCTATTTGAAAA 245547 Query 14537 CCATAAAAACATCTAGCTTCTG 14558 |||||||||||||| || |||| Sbjct 245546 CCATAAAAACATCTGGCCTCTG 245525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482245917252440