Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4472 127 2e-24 seq435 93.3 3e-14 >seq4472 Length=7509737 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || || || || || | |||||||| |||||||| || ||||||||||| | Sbjct 666438 TCCTCCACGCAGCCTCAGGACAAGATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGA 666497 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || |||| || |||||| | |||||| || ||| | ||||| ||||| ||||| ||| Sbjct 666498 CAATGTTCGACCATCTTCTAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGG 666557 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| ||||| ||||| | || ||||| | | | | ||||||| |||||| Sbjct 666558 GATTCCTTCTTTATCTTGAATTT-TAGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTA 666616 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||| |||| || || | || || || ||||||||||| Sbjct 666617 CCTCTAAAGTGATAGTTTTTCCTGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || | ||| || |||| || || || ||||||||||| || ||||| |||| | Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| | | |||||| || || || || || | || | ||||||||||| || Sbjct 667411 AATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGG 667470 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||||||| ||||| |||| || || | | ||| || |||| ||||| Sbjct 667471 ATGCCTTCCTTATCTTGAATTT-TTGCTTTCACATTTTCAATTGTATCACTAGGCTCTAC 667529 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || ||| | || ||||| || ||||| ||||||||||||||| Sbjct 667530 TTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | | ||| || |||| ||||||||| |||||||| ||||| |||||||| | | Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||||||||| || || || |||| | || || ||||| || Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || || | |||| || || | ||| ||||||| ||||| Sbjct 668611 ATTCCTTCTTTGTCCTGGATCT-TTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAAC 668669 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | ||||| ||||||| || ||||| || |||||||| |||||||| Sbjct 668670 CTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCATTTT 668720 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 |||||||| || || || |||||||||||||| | | |||| || ||| || | ||| Sbjct 666919 TGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTTCGACCATCCTCTAGCTGT 666978 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || || | |||||||| |||||||| || | ||||| ||||| ||||| | Sbjct 666979 TTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCTTGAATTT-T 667037 Query 18243 TGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 || || || | | ||| ||| |||| || || ||| | || || ||||||| || Sbjct 667038 GGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACTTCCAAAGTTATTGTTTTGCCAGT 667097 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||||||||| ||||| || ||||| Sbjct 667098 CAATGTTTTCACAAATATCTGCAT 667121 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || ||||||||||||||||| ||||| | | || || |||||| Sbjct 667825 ACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAAAGAGTGCGACCATCTTCA 667884 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | ||||| || ||| ||||||| ||||| ||||| || | |||||||| || Sbjct 667885 AGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGG 667944 Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | || || || | ||| ||| |||| ||||| ||| | ||||| |||| Sbjct 667945 ATTT-TGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACTTCTAATGTGATAGTTTT 668003 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || | |||||| || ||||| ||||| Sbjct 668004 ACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| |||||| ||||||| || | ||||||||||| || ||||| || || | Sbjct 668263 CCTCCCCTTAGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAA 668322 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||| | || ||||| ||| | || | | ||| || || ||| Sbjct 668323 AGTGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGA 668382 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || |||| ||| || | | ||| ||||||| ||| || | Sbjct 668383 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACT 668442 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||| ||| | ||||| ||||| ||||| ||||| || ||||| Sbjct 668443 TCCAAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 >seq435 Length=3082058 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGT---TTTACAA 18170 || ||||||||||| ||||||||||||||||||| || || | | || ||| Sbjct 740614 AGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGAGTGCGTTT---G 740670 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 || ||||| || || |||||| | || || ||||||||||| || | ||||| | | Sbjct 740671 TCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATTCCTTCTTCA 740730 Query 18231 TCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 || ||||| ||| || || | |||||| | ||| ||||| || || Sbjct 740731 TCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCAAGAGTTATT 740790 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||| || |||| |||||||||||||| |||||||| Sbjct 740791 GTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379267563725085