Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq4472 109 5e-19 >seq4472 Length=7509737 Score = 109 bits (120), Expect = 5e-19 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||| || || ||||| || |||||| | || || ||| | || Sbjct 668489 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATAACCTTGGAAGTTGAACCCAGT 668430 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| |||| ||||| | |||||||| | || ||||||| Sbjct 668429 GACACCATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCTGACCAG 668370 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT-TCCAT-GACTATGAACGATTACA 25009 ||||||||||| | ||| ||||| || || |||||| || | ||| | | ||||| | Sbjct 668369 CAACGTTTAATTTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACACTTTCA--GATTATA 668312 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGT 25040 |||||||||||| | || | ||||| || Sbjct 668311 ACATACAGAAAGAATCAACTTTGCATTTGGT 668281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418219713443360