Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4472 120 3e-22 seq435 95.1 1e-14 >seq4472 Length=7509737 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | || || ||||||| ||||| ||||||||||||||||| || Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || ||||| |||||| | ||||||||||||||||| || || Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| |||||| ||||| | ||| | ||| || | || || || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCACTTGGTTCAACT 668214 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | || | ||||| || || | ||||| || || || |||||| || Sbjct 668215 TCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCATACCT 668265 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || ||||| || ||||||||||| | ||| | ||||||||||| || ||| Sbjct 668293 GTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGGCCATCTTCGAGCTGCTTGCCA 668352 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| | || | ||||||||| || || || || ||||||||||| |||||| ||| Sbjct 668353 GCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGTCTTGGATTTTAGCCTTT 668412 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | ||| | ||||| |||| || || || | ||| | |||||||| ||||| ||| Sbjct 668413 ACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTATGGTCTTGCCAGTCAAAGTT 668472 Query 139748 TTTACGAATATTTGCATAGCT 139768 || || || || |||||| || Sbjct 668473 TTGACAAAGATCTGCATACCT 668493 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | ||| || ||||| | || || ||||||||||||||||| || Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||||||||| ||| |||| || | ||||||||| ||||| Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTC-CACT-GTGTCGGTGGGCTCCA 139715 || ||||| ||||| || |||| | |||| | |||| || | || || | ||||| | Sbjct 667927 ATTCCTTCCTTGTC-TTGGATTTTGGCTTTAAC-GTTCTCAATAGTATCACTAGGCTCTA 667984 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | || || || || | ||||| ||||| || |||||| Sbjct 667985 CTTCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCATA 668034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || || | |||||| | |||| || ||||| || |||||||| || || | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTC--TG 666952 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | ||| |||| || || |||||||| ||||| | || || | || |||||||||| Sbjct 666953 AGAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAG 667012 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || |||||||| || ||| |||| | ||||| | ||| | || || | || || Sbjct 667013 GAATTCCTTCTTTATC-TTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCT 667071 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | || | || ||||| ||||| ||||| || ||||| |||||| Sbjct 667072 ACTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCATA 667122 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | | |||||| | || | ||||| |||||||| ||||| ||||| | Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATC--TG 667180 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | | | ||| ||||| ||||| ||||||||| | |||||||| || |||||||| | Sbjct 667181 AGAGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTG 667240 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||| || || ||| |||| | ||| | | ||| | || || | || || Sbjct 667241 GAATACCTTCCTTATCT-TGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCA 667299 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | || | || || || |||| ||||| || |||||||||||| Sbjct 667300 ACTTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCATA 667350 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| ||||| |||||||| || | |||| ||||| | ||| || || Sbjct 666697 GTTGACTCCTTTTGGATGTTATAGTCAGATAAGGTGCGGCCATCTTCTAACTGCTTCCCG 666756 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||||||||| || |||||||| || |||||||| || ||| || ||| Sbjct 666757 GCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCTTCTTTATCTTGGATCTTGGCTTTA 666816 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | ||| | ||||| | || || ||||| | || | || || || || | ||| Sbjct 666817 ACATTTTCAATAGTGTCACTTGGTTCAACCTCTAAAGTAATAGTTTTCCCTGTTAGAGTT 666876 Query 139748 TTTACGAATATTTGCATA 139765 |||||||| || |||||| Sbjct 666877 TTTACGAAGATCTGCATA 666894 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||| |||||||| ||||||||||| | ||| | | ||||| |||||||| || Sbjct 667609 GTAGATTCTTTTTGGATGTTATAATCTGATAATGTACGCCCATCTTCAAGCTGTTTGCCG 667668 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| | || | ||| || || || || || || || ||||| || ||||||| ||| Sbjct 667669 GCAAAAATTAAACGCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGGATTTTTGCCTTT 667728 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | ||| | ||||| | ||||| || || | || | || || || || || ||| Sbjct 667729 ACATTTTCTATGGTGTCACTAGGCTCAACTTCTAATGTGATGGTTTTTCCAGTTAAAGTT 667788 Query 139748 TTTACGAATATTTGCATA 139765 || || || ||||||||| Sbjct 667789 TTGACAAAAATTTGCATA 667806 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| ||||||| ||||| ||||| ||||| || || || || || | ||||| Sbjct 668508 AACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGACAGGGTACGACCATCTTC 668567 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 | || |||||||| |||||| | |||||||| || || || ||||||||||| Sbjct 668568 CAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGAATTCCTTCTTTGTCCTG 668627 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| ||| ||| | | || | ||||| | ||||| ||||| | || | || || Sbjct 668628 GATCTTTGCTTTCACATTCTCAATCGTGTCACTAGGCTCAACCTCTAGTGTGATAGTTTT 668687 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| || || || || || || || ||||| Sbjct 668688 GCCAGTTAATGTCTTAACAAAAATCTGCAT 668717 >seq435 Length=3082058 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 139540 GCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCAT 139599 ||||| ||||| | || | ||||| ||| || ||||||||||||| |||||| | Sbjct 740601 GCCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAG 740660 Query 139600 TGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTAT 139659 |||| ||| || | ||| ||||| ||| | ||||| | ||| ||||| ||||| || Sbjct 740661 AGTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAAT 740720 Query 139660 GCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTC 139719 ||||||| || ||||||||||| | | | ||||| | | ||| || || Sbjct 740721 TCCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTC 740780 Query 139720 AACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || || || |||| |||||||| || || ||||| Sbjct 740781 AAGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCAT 740825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495961482173600