Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq14474 134 2e-26 seq546 134 2e-26 >seq14474 Length=2471489 Score = 134 bits (148), Expect = 2e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 ||||| || || | ||| ||||||||||| |||||| || ||||||||||| | || Sbjct 1674022 TATGTCTCGTATGTTCCCAACTTTTCGGCTAGTTCACAGCTAGCCTCTAATGCGGCAAAA 1674081 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||||||||| ||||| | ||| || | ||| |||||| |||||||||||||| Sbjct 1674082 TAAATGGTTTCAAAAATGTCTGCATTTAGCTTTTGAGCTTCTTCACTATCAAATGGATAT 1674141 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | |||||||| || || ||||| |||||||| || || || || || ||||| | Sbjct 1674142 CTCATCAGAATAAAAGCATCCGCTAAACCTTGAACTCCTATTCCAATGGGCCTATGACGT 1674201 Query 79480 TTATTAGAAATTTCAGC 79496 ||||| || |||| || Sbjct 1674202 TTATTTGATTTTTCCGC 1674218 Score = 129 bits (142), Expect = 8e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || || ||||| ||||| || ||||| | |||||| |||||||| || || ||||| | Sbjct 1672514 ACCTGGAATTCACCAGATAAGACTCTTCTAGTGTAGATATTACTTGTGTAAGGTTCAATT 1672573 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 |||||||||||||| | ||| ||||| |||||||| ||||||||||| || | || ||| Sbjct 1672574 GATTCATTATTTCCAAGAATCTGAGCTGTTGATGCAGTTGGCATAGGCGCTAATAACAAA 1672633 Query 79180 CTATTTCTAAGACC 79193 |||||||||| ||| Sbjct 1672634 CTATTTCTAACACC 1672647 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78786 CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 78845 ||| |||||||||||||| || || | || |||| | || || || ||||| | ||| Sbjct 1671512 CCAGCCGTAGAAATGCATGCTTGTGATCTTTCCATAATTAGGTTCAGCAATATGCACATT 1671571 Query 78846 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 78905 || || || |||||||| ||| | ||||| || || ||||||||||| | || | || Sbjct 1671572 CAAGGACTGGCTTTGATCAATGTAAGCTCCTCTATCAGCAGCCATTTTCAATATATTTTT 1671631 Query 78906 TTGTGGAATTTCCCAAATAGT 78926 || ||||||||||| | ||| Sbjct 1671632 CTGAGGAATTTCCCAGACAGT 1671652 >seq546 Length=398126 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 50344 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 || |||||||| || ||||| || || || |||||||| || || | ||| || || Sbjct 243757 AAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGAAG 243698 Query 50404 TGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 50463 |||||||| | | | | ||||| | ||| ||| | ||||| |||| |||||||||| Sbjct 243697 TGTTTTTCTTCTGATTTCAGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTACTTCT 243638 Query 50464 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 50523 || || ||||| || || |||||||| || |||||||| | ||| || || ||||||| Sbjct 243637 TCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATATTCA 243578 Query 50524 ATTGGGAAAATAACAAATCTATTTGGATT 50552 || || || |||||||| ||| ||||| Sbjct 243577 ATGGGAAAGATAACAAACCTACGGGGATT 243549 Score = 100 bits (110), Expect = 4e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 50210 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 ||||| | | ||||||||||| ||||| || || | || |||||||| ||||| | | Sbjct 245626 TTTCAGTTTTGTCTTTAACATATGTATCAATTAACAAGCTGTACATTTCTGAATGGACAT 245567 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 | ||||| || || ||||| || || |||||||| ||||| |||| ||| |||||| || Sbjct 245566 TCTCAATAGCTATTTGAAAACCATAAAAACATCTGGCCTCTGTAACCTGAACTTCTTGAC 245507 Query 50330 AAAATCGTTC 50339 |||||||| Sbjct 245506 TGAATCGTTC 245497 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 49764 TTTTTTAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCAT 49823 ||||| | | ||||| || || ||| ||||| || |||||||| || ||| |||||| Sbjct 254096 TTTTTCACAACCCAACTCTACAAGCAACCTATCTGCAACAAATTCAATGTATTGTTTCAT 254037 Query 49824 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTC 49883 | | ||||||||||| | || || ||||| | || |||||||| ||||| Sbjct 254036 GAGTGTGTTGTTCATTCCTATCAAGGCGACAGGTAGAGCTTCTGTGAGAAATTCCTGTTC 253977 Query 49884 AATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAA 49943 ||||| || |||||||| | ||| | ||| ||| ||| || | |||| Sbjct 253976 AATGGCAACTGCATCTGTCACAATCTGTGCAACTCTTTTTTCTGAAGGCTTGTTTAATAG 253917 Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 ||| | ||||| | || || ||||| ||||| ||||||| Sbjct 253916 ATGACTGAACATGAGGCAGGCAAAATCACAGTGAAGACCCT 253876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718120360774120