Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq546 105 6e-18 >seq546 Length=398126 Score = 105 bits (116), Expect = 6e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 13516 ATAAAAACTAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGC 13575 ||| ||| |||||||| |||| | | ||||||| ||| |||||||| || ||||| | Sbjct 257359 ATATAAATTAAAAATCTGCATCGAGGGTGAAAACATGATCTTCTTTGTTTGACATAACTC 257300 Query 13576 CCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATA 13635 | ||||| ||||| | |||| | || |||||||| || ||||| || || || | Sbjct 257299 CACACTTTTGGTATTCTCCAACTTTCTTCTCAAAGAAATTGGTTTTGCCCTCAAGACTGA 257240 Query 13636 TATTTTCCATAAAATCAAATGGATTT 13661 ||| |||||| ||||||||||||||| Sbjct 257239 TATGTTCCATGAAATCAAATGGATTT 257214 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 |||| |||||||| || || ||||| || || |||||||| || || || | || | Sbjct 243759 CCAAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGA 243700 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 ||| || ||||| || ||||||| ||| || || || || || || |||||||||| Sbjct 243699 AGTGTTTTTCTTCTGATTTCAGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTACTT 243640 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | || || ||||| ||| || | ||||| |||||||| ||| || |||| |||| Sbjct 243639 CTTCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATATT 243580 Query 14437 ATATAGGAAAAACTACAAATCT 14458 || ||||| | ||||| || Sbjct 243579 CAATGGGAAAGATAACAAACCT 243558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479628858212200