Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq546 107 2e-18 >seq546 Length=398126 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 ||||||||||||| ||||| ||||| || || |||||||| || || || | || | Sbjct 243759 CCAAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGA 243700 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 ||| || ||||| || ||||||| ||| || | || || || || |||||||||| Sbjct 243699 AGTGTTTTTCTTCTGATTTCAGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTACTT 243640 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | || || ||||| ||| || | ||||| |||||||| ||| || |||| |||| Sbjct 243639 CTTCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATATT 243580 Query 14225 ATATAGGAAAAACTACAAATCT 14246 || ||||| | ||||| || Sbjct 243579 CAATGGGAAAGATAACAAACCT 243558 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 13933 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAA 13992 ||||||||||| | ||||| |||||||| || || | || || |||||||| |||||| Sbjct 245606 TATGTATCAATTAACAAGCTGTACATTTCTGAATGGACATTCTCAATAGCTATTTGAAAA 245547 Query 13993 CCATAAAAACATCTAGCTTCTG 14014 |||||||||||||| || |||| Sbjct 245546 CCATAAAAACATCTGGCCTCTG 245525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478489893642120