Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq16166 93.3 6e-14 seq14474 93.3 6e-14 >seq16166 Length=1540 Score = 93.3 bits (102), Expect = 6e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 96892 GGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCG 96951 |||| || ||| | || | ||||| || |||||||| || || |||||||||| | | Sbjct 258 GGCCTGGAGCTTTTGCTATTTACTTAGAGCCTTGGCATGCTGATATTTTTGACTTCCTTG 199 Query 96952 AGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCT 97011 | || || ||| ||||| || || ||| || || || |||||||||||| | | Sbjct 198 ATTTGAAAAAGAACACTGGCAAAGAGGAACAACGTGCAAGAGATTTGTTTTATGCATTGT 139 Query 97012 GGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCC 97071 || | || ||||| || ||| || | || | | | || ||||| || ||||||| Sbjct 138 GGATACCTGATTTATTTATGCAGAGGGTTGAAAAGGATGAAATGTGGAGTCTTATGTGCC 79 Query 97072 CCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGA 97117 | || ||||| || || ||||||||||| ||||| ||||| Sbjct 78 CTGATGAATCACCTGGGCTCCATGATTGCTGGGGTGAAGAATTTGA 33 >seq14474 Length=2471489 Score = 93.3 bits (102), Expect = 6e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 96892 GGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCG 96951 |||| || ||| | || | ||||| || |||||||| || || |||||||||| | | Sbjct 1696590 GGCCTGGAGCTTTTGCTATTTACTTAGAGCCTTGGCATGCTGATATTTTTGACTTCCTTG 1696531 Query 96952 AGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCT 97011 | || || ||| ||||| || || ||| || || || |||||||||||| | | Sbjct 1696530 ATTTGAAAAAGAACACTGGCAAAGAGGAACAACGTGCAAGAGATTTGTTTTATGCATTGT 1696471 Query 97012 GGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCC 97071 || | || ||||| || ||| || | || | | | || ||||| || ||||||| Sbjct 1696470 GGATACCTGATTTATTTATGCAGAGGGTTGAAAAGGATGAAATGTGGAGTCTTATGTGCC 1696411 Query 97072 CCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGA 97117 | || ||||| || || ||||||||||| ||||| ||||| Sbjct 1696410 CTGATGAATCACCTGGGCTCCATGATTGCTGGGGTGAAGAATTTGA 1696365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740906050853080