Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq4472 156 3e-33 seq435 95.1 9e-15 seq11726 87.8 1e-12 >seq4472 Length=7509737 Score = 156 bits (172), Expect = 3e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||||||| ||| ||||| |||||||| |||||||| || ||||||||| Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | |||||||| || || |||||| | ||||| | |||||| || || Sbjct 667411 AATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGG 667470 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| || || |||||| ||| || ||| |||| || ||||| ||| ||||| Sbjct 667471 ATGCCTTCCTTATCTTGAATTTTTGCT-TTCACATTTTCAATTGTATCACTAGGCTCTAC 667529 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || ||||| || || || | |||||| |||||||||||||| Sbjct 667530 TTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | || ||||| | ||| || || || |||||||| ||||||||||| Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | ||||| | || || ||||| | |||| ||| ||||| ||| |||| Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| || || |||||| ||| || ||| ||||||||||||| || ||| || Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCT-TTCACATTTTCTATGGTATCACTTGGTTCAAC 667301 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 667302 TTCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCATA 667350 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| || | || || ||||| || || |||||||| ||||| || || Sbjct 668035 CCACCTCTCAACCTCAGCACCAAGTGAAGTGTAGATTCTTTTTGAATGTTATAGTCCGAA 668094 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | |||||| ||||| | |||| |||||| || || |||| Sbjct 668095 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGACGTTGCTGATCAGGTGGA 668154 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| ||||| ||| |||||| |||| || ||||| || ||| || Sbjct 668155 ATACCTTCTTTGTCTTGGATTTTAGCT-TTTACATTTTCAATTGTATCACTTGGTTCAAC 668213 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||||| || || || || |||||||| |||||||| |||||| Sbjct 668214 TTCTAGAGTAATTGTCTTCCCAGTTAGAGTTTTAACAAAAATCTGCATA 668262 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| || || || | ||| | || || |||||||| ||||| ||||| | Sbjct 667579 CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGAT 667638 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | | ||||| | |||||||| || | || ||||| |||||||| |||| Sbjct 667639 AATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGA 667698 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || ||||| || ||||| ||||||| |||||||||| || ||| || || Sbjct 667699 ATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAACT 667758 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || |||||||| || || | |||||| ||||||||||||||| Sbjct 667759 TCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCATA 667806 Score = 131 bits (144), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | ||| || ||||| | |||||| ||||| || || || |||||||| || | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTC--TG 666952 Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| | ||| | || |||| ||||| |||||| | || | | ||||| ||| | Sbjct 666953 AGAGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAG 667012 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||||||||||||| || ||||||| ||||| |||| || ||||| ||| ||||| Sbjct 667013 GAATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTA 667072 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || || || || ||||| || |||| ||||| ||||| || |||||| Sbjct 667073 CTTCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCATA 667122 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || || || | ||| | || ||||| | || || ||||| |||||||| ||||| Sbjct 668263 CCTCCCCTTAGTCTGAGTACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAA 668322 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| | || |||||||| | || |||||||| ||||| ||| Sbjct 668323 AGTGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGA 668382 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||| ||||||| |||| ||||| || || ||| || Sbjct 668383 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCACTGGGTTCAACT 668442 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| ||||| || || |||| |||||| ||||| || |||||| Sbjct 668443 TCCAAGGTTATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCATA 668490 Score = 114 bits (126), Expect = 9e-21 Identities = 168/234 (72%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||||||||| ||| || ||||| || || ||||| || || ||||| || Sbjct 668491 CCTCCTCTCAATCTTAGAACCAAGTGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAC 668550 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| ||||| || |||||| | ||||| | || || || |||| Sbjct 668551 AGGGTACGACCATCTTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 668610 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| || |||||| || ||| | || || || || ||| || || Sbjct 668611 ATTCCTTCTTTGTCCTGGATCTTTGCT-TTCACATTCTCAATCGTGTCACTAGGCTCAAC 668669 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369 |||| || || ||||| || || | || || |||||||| ||||| ||||| Sbjct 668670 CTCTAGTGTGATAGTTTTGCCAGTTAATGTCTTAACAAAAATCTGCAT-TTTGA 668722 Score = 113 bits (124), Expect = 3e-20 Identities = 152/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTTCTAAT 15217 |||||| ||||| ||||| ||||||||||| || | | ||| ||| | ||||||| | Sbjct 666462 ATGAAGTGTGGATTCTTTCTGTATGTTGTAGTC--TGACAATGTTCGACCATCTTCTAGT 666519 Query 15218 TGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATT 15277 ||||| || || | || | | ||| || || || ||||||||||| || |||| Sbjct 666520 TGTTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATCTTGAATT 666579 Query 15278 TT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACC 15336 || ||| || || ||||||| || || || ||||| ||||| || || ||||| || Sbjct 666580 TTAGCT-TTGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCC 666638 Query 15337 TGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| ||||| || || ||||||||||| Sbjct 666639 TGTTAGAGTCTTAACGAAAATTTGCAT 666665 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||| | || || || | ||| | || || || ||||| ||||| || || Sbjct 666665 TGCCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAG 666724 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | | | |||||||| || || || || | |||| ||||||||||||| | Sbjct 666725 ATAAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAG 666784 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| |||||||| || || ||| || ||| |||| || || || || ||| | Sbjct 666785 GAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAA 666844 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct 666845 CCTCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCATA 666894 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| || || || || || || || ||||| |||||||| ||||| || || Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | ||||| || || | || | | ||| || || ||| Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| ||||| |||||| || || | || || ||||| ||| ||||| Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || |||||||| || || ||||| || ||||| |||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCATA 668034 >seq435 Length=3082058 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15140 CCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGA 15199 |||||||| | || || | ||||| || || |||||||| |||| ||||| |||| Sbjct 740602 CCTCTCAAACGTAGCACCATGTGAAGCGTTGATTCTTTTTGAATGTCATAATCTGATAGA 740661 Query 15200 ATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATT 15259 | | ||| || || || || || || |||||| | |||||| || |||||| Sbjct 740662 GTGCGTTTGTCATCCAACTGCTTACCCGCAAATATCAGCCTTTGTTGATCTGGAGGAATT 740721 Query 15260 CCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCT 15319 ||||||| || |||||| || ||||| | ||||| || ||||| || Sbjct 740722 CCTTCTTCATCTTGAATTTTTTGTTTCACAATATTGATGGTGTCAGACGACTCTACTTCA 740781 Query 15320 AAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 | || || ||||| || ||||| |||||||||||||| ||||| || Sbjct 740782 AGAGTTATTGTTTTTCCAGTCAGGGTTTTTACAAAAATATGCATTTT 740828 >seq11726 Length=1646561 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | ||| | |||||||| | || || ||||| || || ||||||||| | Sbjct 660154 CCACCTCTAAGTCTGAGTACTAAATGTAAAGTAGACTCTTTCTGAATATTGTAATCGGAT 660095 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | | ||||| || ||||||||||| | ||||| || |||||||| ||| Sbjct 660094 AGTGTTCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 660035 Query 15257 ATTCCT 15262 |||||| Sbjct 660034 ATTCCT 660029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362106222362553