Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4472 104 2e-17 >seq4472 Length=7509737 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || |||||||| || || | || | || |||||||| ||||| ||||| || | Sbjct 666895 CCACCACGCAACCTCAAAACAAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 666954 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | |||| | ||||| |||||||| || || ||||||||||||| ||||| || Sbjct 666955 AGTGTTCGACCATCCTCTAGCTGTTTTCCAGCGAAAATAAGTCTCTGTTGATCGGGAGGA 667014 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || ||||| || |||||| |||||| | | | |||||| | ||| || | Sbjct 667015 ATTCCTTCTTTATCTTGAATTTTGGCTTTTACGTTTTCAATAGTATCACTAGGTTCTACT 667074 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | || || ||||| || || || ||||| ||||| || ||||| Sbjct 667075 TCCAAAGTTATTGTTTTGCCAGTCAATGTTTTCACAAATATCTGCAT 667121 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||||| || ||| || || | ||||| ||||| || ||||| || || ||||| | Sbjct 667577 TTCCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTG 667636 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | ||| | || || |||||||| || ||| |||| | | ||| || || | Sbjct 667637 ATAATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTG 667696 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | |||||||| || ||||| ||||| | | | || || | |||||| Sbjct 667697 GAATACCCTCTTTATCTTGGATTTTTGCCTTTACATTTTCTATGGTGTCACTAGGCTCAA 667756 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | || |||||||| || |||||||||||||||||||||||||| Sbjct 667757 CTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || ||||| |||| |||| || | || || || ||||| ||||||||||| | | Sbjct 667351 CCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGAC 667410 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | |||| | | || || | ||| ||||| || |||| | || || ||||| || Sbjct 667411 AATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGG 667470 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||| || || || |||||| ||| || | | | ||||| | |||||| | Sbjct 667471 ATGCCTTCCTTATCTTGAATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACT 667530 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || | || ||||| || || ||||||||||| ||||||||||||||| Sbjct 667531 TCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCATT 667578 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || ||||| | ||| || |||| || | ||||| || ||||| || |||||||| | Sbjct 667123 CCACCTCGAAGCCTCAAAACCAGATGGAGTGTAGATTCTTTTTGGATGTTGTAATCTGAG 667182 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || || ||||| ||||| ||| |||| || | ||| ||||| || Sbjct 667183 AGGGTTCGGCCATCTTCAAGCTGCTTACCAGCAAAAATCAGACGCTGTTGATCGGGTGGA 667242 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || || || |||||| ||| || | | | ||||| | || || | Sbjct 667243 ATACCTTCCTTATCTTGAATTTTAGCTTTCACATTTTCTATGGTATCACTTGGTTCAACT 667302 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| ||||| ||||| | |||||||||||| |||||||| Sbjct 667303 TCTAGTGTAATAGTTTTTCCTGTCAGAGTTTTGACAAATATTTGCAT 667349 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||||| ||||||| ||| | || || || |||||||| || || || | Sbjct 667807 CCACCTCTTAACCTCAACACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAA 667866 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | || || ||||||||||| ||| | ||||| || |||||||| || Sbjct 667867 AGAGTGCGACCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTTTGCTGATCAGGAGGA 667926 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| ||||| ||| || | | | |||||| | |||||| | Sbjct 667927 ATTCCTTCCTTGTCTTGGATTTTGGCTTTAACGTTCTCAATAGTATCACTAGGCTCTACT 667986 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | || || |||||||| || | |||||||| ||||| ||||| Sbjct 667987 TCTAATGTGATAGTTTTACCAGTAAGTGTTTTGACGAAAATCTGCAT 668033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414489265265002