Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4472 113 3e-20 >seq4472 Length=7509737 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | || |||||| | ||| ||||| ||||| ||||| || || || ||||| Sbjct 666667 CCTCCTCTGAGCCTCAACACAAGATGTAATGTTGACTCCTTTTGGATGTTATAGTCAGAT 666726 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || || | || || || ||||| || ||| || | |||||| ||||| | || Sbjct 666727 AAGGTGCGGCCATCTTCTAACTGCTTCCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 666786 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || |||||||| || ||| ||| || ||| ||| ||||| | |||| ||| Sbjct 666787 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCACTTGGTTCAACC 666846 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | ||| || ||||| || || |||||||||||||| || ||||| Sbjct 666847 TCTAAAGTAATAGTTTTCCCTGTTAGAGTTTTTACGAAGATCTGCAT 666893 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||||||||| || || ||||| ||||| || ||||| || | | | || || Sbjct 668281 ACCAAATGCAAAGTTGATTCTTTCTGTATGTTATAATCTGAAAGTGTACGGCCATCTTCG 668340 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 | ||||| ||| ||| ||||||||||||||||| | ||| || |||||||| || | Sbjct 668341 AGCTGCTTGCCAGCAAAAATTAAACGTTGCTGGTCAGGGGGAATACCTTCTTTGTCTTGG 668400 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| ||||| ||| ||| ||||| |||||| ||| |||| ||||| || Sbjct 668401 ATTTTAGCC---TTTACATTTTCAATGGTGTCACTGGGTTCAACTTCCAAGGTTATGGTC 668457 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || | |||||| || || || ||||| Sbjct 668458 TTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 668489 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTG 33225 ||| | ||| || ||||| ||||| ||||| || ||||| | | || || | ||| Sbjct 666462 ATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCTGACAATGTTCGACCATCTTCTAGTTG 666521 Query 33226 CTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGC 33285 ||||| ||| || | | |||||| || | ||| || |||||||| || ||| Sbjct 666522 TTTTCCGGCAAAAATAAGCCTTTGCTGATCTGGGGGGATTCCTTCTTTATCTTGAATTTT 666581 Query 33286 CTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGT 33345 ||| || ||| || ||||| |||| | || || | ||| || |||||||| || Sbjct 666582 AGCTTTGACGTTTTCTATTGTGTCACTGGGCTCTACCTCTAAAGTGATAGTTTTTCCTGT 666641 Query 33346 AAGAGTTTTTACGAAAATTTGCATG 33370 ||||| || ||||||||||||||| Sbjct 666642 TAGAGTCTTAACGAAAATTTGCATG 666666 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | || || |||||||| ||||||||||| ||||| | | || || Sbjct 667369 ACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGACAATGTTCTTCCATCTTCT 667428 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 || ||||| ||| || || || | ||| || || | || |||||||| || || | Sbjct 667429 AACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGGGATGCCTTCCTTATCTTGA 667488 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || ||| || ||| ||| || || | || | || || | |||||| || ||| Sbjct 667489 ATTTTTGCTTTCACATTTTCAATTGTATCACTAGGCTCTACTTCTAAAGTTATGGTCTTT 667548 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || | |||||| || ||||||||||| Sbjct 667549 CCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | || ||| || | |||||| || || |||||||| || || ||||| || Sbjct 667579 CCTCCTCTCAGCCTCAATACAAGATGCAAAGTAGATTCTTTTTGGATGTTATAATCTGAT 667638 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || | | || || | || || || ||| |||||||| || ||||| | || Sbjct 667639 AATGTACGCCCATCTTCAAGCTGTTTGCCGGCAAAAATTAAACGCTGTTGGTCAGGTGGA 667698 Query 33263 ATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 || || ||||| || | | | |||| |||| ||| || ||||| | || | | Sbjct 667699 ATACCCTCTTTATCTTGGATTTTTGCCT---TTACATTTTCTATGGTGTCACTAGGCTCA 667755 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || | || || |||||||| || | |||||| || ||||||||||| Sbjct 667756 ACTTCTAATGTGATGGTTTTTCCAGTTAAAGTTTTGACAAAAATTTGCAT 667805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318713367608634