Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq546 118 9e-22 >seq546 Length=398126 Score = 118 bits (130), Expect = 9e-22 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 13538 AAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAt 13597 |||||||| || || || || || || ||||||||||| || | || || || || Sbjct 243757 AAGTTTTCATTTACAATTCCATCGCTTGCAGCAAAAAAGGCTAAGATATGAGAGATGAAG 243698 Query 13598 tttttttCGTTTTCTGA---CAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACC 13654 | |||||| |||||| || ||| ||| || | ||| |||||||||| |||||| Sbjct 243697 TGTTTTTC---TTCTGATTTCAGTTTTTCCCAGTCAGAAAAGTCTTTTGATAGATCTACT 243641 Query 13655 TCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAA 13714 || || |||||||| ||||| || | || |||||||||||| ||| ||||| | ||| Sbjct 243640 TCTTCTACGGTCCAGAAAGACGCCTCTGCTTTCTTATACATCTGCCACATATCTTGATAT 243581 Query 13715 ACAATGGGAAACACAAC 13731 |||||||||| | ||| Sbjct 243580 TCAATGGGAAAGATAAC 243564 Score = 114 bits (126), Expect = 1e-20 Identities = 89/106 (84%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 13413 TGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCG 13472 ||||| || ||| ||||| || || ||||| |||||||||||||| | ||| || || | Sbjct 245617 TGTCTTTAACATATGTATCAATTAACAAGCTGTACATTTCTGAATGGACATTCTCAATAG 245558 Query 13473 CTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct 245557 CTATTTGAAAACCATAAAAACATCTGGCCTCTGTAACCTGAACTTC 245512 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 12955 TTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCAT 13014 ||||| ||| || || |||| | ||| || || |||||||| || ||||| |||||||| Sbjct 254096 TTTTTCACAACCCAACTCTACAAGCAACCTATCTGCAACAAATTCAATGTATTGTTTCAT 254037 Query 13015 TAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttC 13074 | |||||||||||| || ||||| | ||||||||| | ||| | | ||| Sbjct 254036 GAGTGTGTTGTTCATTCCTATCAAGGCGACAGGTAGAGCTTCTGTGAGAAATTCCTGTTC 253977 Query 13075 TATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAG 13134 || ||||||| || | || || | | | | || ||| | || ||| |||| Sbjct 253976 AATGGCAACTGCATCTGTCACAATCTGTGCAACTCTTTTTTCTGAAGGCTTGTTTAATAG 253917 Query 13135 ATGCTTAAACATCATACATGCAAAATCACAGTG 13167 ||| | ||||| | || |||||||||||||| Sbjct 253916 ATGACTGAACATGAGGCAGGCAAAATCACAGTG 253884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430895558797266