Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasteatoda_20tepidariorum_20[refseq_20GCF_5F000365465.2_202017-04- 14] 16,533 sequences; 1,445,396,121 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4472 91.5 1e-13 >seq4472 Length=7509737 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || ||||| |||| || ||||| || ||| || ||||| || |||||||| | Sbjct 667350 ACCACCACGCAATCTTAGAACCAAATGGAGGGTGGATTCTTTTTGGATATTGTAATCGGA 667409 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 |||| || | || || | ||||||||| || |||| || | || ||||| || Sbjct 667410 CAATGTTCTTCCATCTTCTAACTGCTTACCAGCGAAAATCAACCTTTGTTGATCTGGAGG 667469 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTG-ATAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||| || |||||| ||||| | | | || ||||| ||| ||| Sbjct 667470 GATGCCTTCCTTATCTTGAATTTT-TGCTTTCACATTTTCAATTGTATCACTAGGCTCTA 667528 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | |||||||| || ||||| | ||||||||||||||| ||||| Sbjct 667529 CTTCTAAAGTTATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 667577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421166319594533